| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0570 |
|---|
| Symbol | |
|---|
| ID | 6971043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 570939 |
|---|
| End bp | 572615 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643384615 |
|---|
| Product | putative cation:proton antiport protein |
|---|
| Protein accession | YP_002269129 |
|---|
| Protein GI | 209397749 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.861339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCACG CCACCCCGCT TATCACCACC ATTGTTGGCG GCCTTGTGCT CGCCTTTATC
CTCGGCATGC TGGCCAATAA ACTACGTATT TCTCCTCTGG TGGGATATCT GTTAGCGGGT
GTGCTGGCAG GACCATTCAC TCCGGGCTTT GTTGCCGATA CCAAGCTTGC GCCGGAACTG
GCTGAACTGG GCGTCATTCT GTTGATGTTT GGCGTGGGTC TGCACTTTTC GCTCAAGGAT
TTGATGGCGG TAAAGGCCAT CGCCATTCCC GGTGCGATCG CCCAGATAGC CGTGGCGACG
CTGCTGGGTA TGGCGCTCTC TGCCGTGCTG GGCTGGTCGT TAATGACCGG TATCGTGTTC
GGTTTATGTC TTTCCACCGC CAGTACCGTG GTGTTACTGC GCGCACTTGA AGAACGGCAA
TTAATTGACA GTCAGCGTGG GCAAATCGCC ATCGGTTGGT TGATTGTGGA AGACCTGGTA
ATGGTTCTGA CGCTGGTGTT GCTGCCCGCA GTGGCAGGAA TGATGGAACA GGGCGATGTG
GGCTTTGCCA CTCTTGCAGT CGATATGGGG ATCACCATCG GCAAAGTGAT CGCGTTTATC
GCCATTATGA TGCTGGTAGG TCGCCGTCTG GTGCCGTGGA TTATGGCACG CAGCGCGGCA
ACCGGTTCTC GCGAGCTGTT TACCCTGTCG GTGCTGGCGC TGGCGTTAGG GATTGCCTTT
GGTGCGGTAG AGCTGTTTGA TGTCTCCTTT GCACTCGGTG CGTTCTTTGC CGGGATGGTA
CTGAACGAGT CTGAACTGAG TCACCGTGCC GCCCACGATA CGCTGCCATT GCGCGACGCG
TTTGCGGTGC TGTTTTTTGT CTCCGTCGGG ATGTTGTTTG ATCCGTTAAT TCTGATTCAG
CAACCGCTGG CAGTGCTGGC GACGCTGGCG ATTATTCTGT TTGGTAAGTC GTTAGCCGCG
TTTTTCCTGG TGCGACTGTT TGGTCACTCC CAACGTACGG CATTAACTAT CGCCGCCAGC
CTGGCGCAGA TTGGTGAGTT CGCGTTTATC CTGGCGGGAC TGGGAATGGC ATTGAATTTA
CTGCCGCAGG CCGGACAAAA CCTGGTACTG GCAGGGGCGA TCCTGTCGAT TATGCTCAAC
CCAGTACTGT TCGCACTACT GGAGAAATAT CTGGCGAAGA CCGAAACGCT GGAAGAGCAG
ACGCTGGAAG AGGCAATCGA AGAAGAGAAG CAGATCCCAG TGGATATTTG CAACCATGCG
CTATTGGTGG GTTACGGTCG TGTAGGCAGC CTGCTGGGGG AGAAATTGCT CGCCTCTGAT
ATTCCGCTGG TGGTGATTGA GACGTCACGA ACCCGTGTTG ATGAGCTGCG AGAGCGCGGG
GTCCGCGCAG TATTGGGCAA TGCGGCGAAC GAAGAAATTA TGCAACTGGC GCATCTGGAA
TGTGCAAAAT GGCTGATCCT GACGATCCCC AACGGTTATG AAGCGGGTGA GATTGTGGCA
TCTGCCCGCG CGAAAAATCC GGATATTGAG ATTATTGCCC GCGCCCATTA TGACGATGAA
GTGGCGTATA TCACCGAACG TGGTGCGAAT CAAGTAGTGA TGGGCGAGCG TGAAATTGCC
CGTACTATGC TGGAACTGCT GGAAACGCCA CCGGCGGGTG AAGTGGTGAC GGGGTAA
|
|---|
| Protein sequence | MHHATPLITT IVGGLVLAFI LGMLANKLRI SPLVGYLLAG VLAGPFTPGF VADTKLAPEL
AELGVILLMF GVGLHFSLKD LMAVKAIAIP GAIAQIAVAT LLGMALSAVL GWSLMTGIVF
GLCLSTASTV VLLRALEERQ LIDSQRGQIA IGWLIVEDLV MVLTLVLLPA VAGMMEQGDV
GFATLAVDMG ITIGKVIAFI AIMMLVGRRL VPWIMARSAA TGSRELFTLS VLALALGIAF
GAVELFDVSF ALGAFFAGMV LNESELSHRA AHDTLPLRDA FAVLFFVSVG MLFDPLILIQ
QPLAVLATLA IILFGKSLAA FFLVRLFGHS QRTALTIAAS LAQIGEFAFI LAGLGMALNL
LPQAGQNLVL AGAILSIMLN PVLFALLEKY LAKTETLEEQ TLEEAIEEEK QIPVDICNHA
LLVGYGRVGS LLGEKLLASD IPLVVIETSR TRVDELRERG VRAVLGNAAN EEIMQLAHLE
CAKWLILTIP NGYEAGEIVA SARAKNPDIE IIARAHYDDE VAYITERGAN QVVMGEREIA
RTMLELLETP PAGEVVTG
|
|---|
| |