Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0530 |
Symbol | queC |
ID | 6967822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 534502 |
End bp | 535197 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643384577 |
Product | queuosine biosynthesis protein QueC |
Protein accession | YP_002269091 |
Protein GI | 209396500 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0925721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.679412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTG CTGTCGTTGT GTTCAGTGGA GGCCAGGATT CCACCACCTG TCTGGTGCAG GCATTACAAC AATATGATGA AGTCCATTGC GTGACGTTCG ATTACGGTCA GCGCCATCGC GCAGAAATCG ACGTGGCACG CGAACTGGCG CTGAAACTGG GGGCACGCGC GCATAAGGTT CTTGATGTAA CGCTGCTCAA CGAGCTGGCG GTCAGCAGCC TGACGCGTGA CAGCATTCCG GTGCCTGATT ATGAACCTGA AGCCGATGGC ATCCCGAATA CGTTTGTCCC AGGGCGTAAT ATTTTGTTCC TGACGCTGGC GGCAATATAT GCGTATCAGG TAAAAGCAGA AGCCGTAATT ACCGGCGTCT GCGAAACGGA TTTCTCCGGC TACCCGGATT GCCGCGATGA GTTTGTGAAA GTACTAAACC ATGCCGTCAG TTTGGGCATG GCGAAAGATA TTCGTTTTGA AACGCCGCTG ATGTGGATTG ATAAAGCGGA AACCTGGGCG CTGGCAGATT ATTACGGCAA ACTGGATTTA GTCCGTAACG AAACGTTGAC CTGCTATAAC GGCATTAAAG GCGACGGTTG CGGTCATTGT GCGGCATGTA ATTTACGCGC CAACGGTTTG AATCATTATC TGGCCGATAA ACCGACGGTG ATGGCAGCGA TGAAGCAGAA AACCGGGTTG AAGTAA
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Protein sequence | MKRAVVVFSG GQDSTTCLVQ ALQQYDEVHC VTFDYGQRHR AEIDVARELA LKLGARAHKV LDVTLLNELA VSSLTRDSIP VPDYEPEADG IPNTFVPGRN ILFLTLAAIY AYQVKAEAVI TGVCETDFSG YPDCRDEFVK VLNHAVSLGM AKDIRFETPL MWIDKAETWA LADYYGKLDL VRNETLTCYN GIKGDGCGHC AACNLRANGL NHYLADKPTV MAAMKQKTGL K
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