Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0478 |
Symbol | brnQ |
ID | 6968850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 485157 |
End bp | 486476 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643384526 |
Product | branched-chain amino acid transport system II carrier protein |
Protein accession | YP_002269040 |
Protein GI | 209397609 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1114] Branched-chain amino acid permeases |
TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.709941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATC AATTAAGATC GCGCGATATC ATCGCTCTGG GCTTTATGAC ATTTGCGTTG TTCGTCGGCG CAGGTAACAT TATTTTCCCT CCAATGGTCG GCTTACAGGC AGGCGAACAC GTCTGGACTG CGGCATTCGG CTTCCTCATT ACTGCCGTTG GCCTGCCGGT ATTAACGGTA GTGGCGCTGG CAAAAGTTGG CGGCGGTGTT GACAGCCTCA GCACGCCAAT CGGTAAAGTC GCTGGCGTAC TGCTGGCAAC GGTTTGTTAC CTGGCGGTGG GGCCGCTTTT CGCTACGCCG CGTACAGCTA CCGTTTCTTT TGAAGTGGGG ATTGCGCCGC TGACGGGTGA TTCCGCGCTG CCGCTGTTTA TCTACAGCCT GGTCTATTTC GCTATCGTTA TTCTGGTTTC GCTCTATCCG GGCAAGCTGC TGGATACCGT GGGCAACTTC CTTGCGCCGC TGAAAATTAT CGCGCTGGTC ATCCTGTCTG TTGCCGCGAT TGTCTGGCCG GCGGGTTCTA TCAGCACGGC GACTGAGGCT TATCAAAACG CTGCGTTTTC TAACGGCTTC GTCAACGGCT ATCTGACCAT GGATACGCTG GGCGCAATGG TGTTTGGTAT CGTTATTGTT AACGCGGCGC GTTCTCGTGG CGTTACCGAA GCGCGCCTAC TGACCCGTTA TACCGTCTGG GCTGGCCTGA TGGCGGGTGT TGGTCTGACT CTGCTGTACC TGGCGCTGTT CCGTCTGGGT TCAGACAGCG CGTCGCTGGT CGATCAGTCT GCAAACGGCG CTGCTATTCT GCATGCTTAC GTTCAGCACA CCTTTGGCGG CGGCGGTAGC TTCCTGCTGG CGGCGTTAAT CTTCATCGCC TGCCTGGTAA CGGCAGTTGG CCTGACCTGT GCTTGTGCAG AATTCTTTGC CCAGTACGTA CCGCTCTCTT ATCGTACGCT GGTGTTTATC CTCGGCGGCT TCTCGATGGT GGTTTCTAAC CTCGGCTTAA GCCAGCTGAT CCAGATCTCC GTACCGGTGC TGACCGCTAT TTATCCGCCG TGTATCGCAC TGGTTGTATT AAGTTTTACA CGCTCATGGT GGCATAATTC GTCCCGCGTG ATTGCTCCGC CGATGTTTAT CAGCCTGCTT TTTGGTATTC TCGACGGGAT CAAAGCATCT GCATTCAGCG ATATCTTACC GTCCTGGGCG CAGCGTTTAC CGCTGGCCGA ACAAGGTCTG GCGTGGTTAA TGCCAACAGT GGTGATGGTG GTTCTGGCCA TTATCTGGGA TCGCGCGGCA GGTCGTCAGG TGACCTCCAG CGCTCACTAA
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Protein sequence | MTHQLRSRDI IALGFMTFAL FVGAGNIIFP PMVGLQAGEH VWTAAFGFLI TAVGLPVLTV VALAKVGGGV DSLSTPIGKV AGVLLATVCY LAVGPLFATP RTATVSFEVG IAPLTGDSAL PLFIYSLVYF AIVILVSLYP GKLLDTVGNF LAPLKIIALV ILSVAAIVWP AGSISTATEA YQNAAFSNGF VNGYLTMDTL GAMVFGIVIV NAARSRGVTE ARLLTRYTVW AGLMAGVGLT LLYLALFRLG SDSASLVDQS ANGAAILHAY VQHTFGGGGS FLLAALIFIA CLVTAVGLTC ACAEFFAQYV PLSYRTLVFI LGGFSMVVSN LGLSQLIQIS VPVLTAIYPP CIALVVLSFT RSWWHNSSRV IAPPMFISLL FGILDGIKAS AFSDILPSWA QRLPLAEQGL AWLMPTVVMV VLAIIWDRAA GRQVTSSAH
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