Gene ECH74115_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0428 
Symbol 
ID6969930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp437256 
End bp438467 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content57% 
IMG OID643384480 
Productputative 3-hydroxyphenylpropionic transporter MhpT 
Protein accessionYP_002268994 
Protein GI209399594 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTC GTACCCCTTC ATCATCTTCA TCCCGCCTGA TGCTGACCAT CGGGCTTTGT 
TTTTTGGTCG CTCTGATGGA AGGGCTGGAT CTTCAGGCGG CTGGCATTGC GGCGGGTGGC
ATCGCCCAGG CTTTCGCACT CGATAAAATG CAAATGGGCT GGATATTCAG CGCCGGAATA
CTCGGTTTAC TACCCGGCGC GTTGGTTGGC GGAATGCTGG CGGACCGTTA TGGTCGCAAG
CGCATTTTGA TTGGCTCAGT TGCGCTGTTT GGTTTGTTCT CGCTGGCAAC GGCGATTGCC
TGGGATTTCC CCTCACTGGT CTTTGCGCGG CTGATGACCG GTGTCGGGCT GGGGGCGGCG
TTGCCGAATC TTATCGCCCT GACGTCTGAA GCCGCGGGTC CACGTTTTCG TGGGACGGCA
GTGAGCCTGA TGTATTGCGG TGTTCCCATT GGCGCGGCGC TGGCGGCGAC ACTGGGTTTC
GCGGGGGCAA ACTTAGCATG GCAAACGGTG TTTTGGGTAG GTGGTGTGGT GCCGTTGATT
CTGGTGCCGC TATTAATGCG CTGGCTGCCG GAGTCGGCGG TTTTCGCTGG CGAAAAACAG
GCTGCGCCAC CACTGCGTGC GTTATTTGCG CCAGAAACGG CAACCGCGAC GCTGCTGCTG
TGGCTGTGTT ATTTCTTCAC TCTGCTGGTG GTTTACATGT TGATCAACTG GCTACCGCTG
CTTTTGGTGG AGCAAGGATT CCAGCCATCG CAGGCGGCAG GGGTGATGTT TGCACTGCAA
ATGGGTGCGG CGAGCGGGAC GTTAATGTTG GGCGCATTGA TGGATAAGCT GCGTCCAGTA
ACCATGTCGC TACTGATTTA TAGCGGCATG TTAGCTTCGC TGCTGGCGCT TGGAACGGTG
TCGTCATTTA ACGGTATGTT GCTGGCGGGA TTTGTCGCGG GGTTGTTTGC GACAGGTGGG
CAAAGCGTTT TGTATGCCCT GGCACCGTTG TTTTACAGTT CGCAGATCCG CGCAACAGGT
GTGGGAACAG CCGTGGCGGT AGGGCGTCTG GGGGCTATGA GCGGTCCGTT ACTGGCCGGG
AAAATGCTGG CATTAGGCAC TGGCACGGTC GGCGTAATGG CCGCTTCTGC ACCGGGTATT
CTTGTTGCTG GGTTGGCGGT GTTTATTTTG ATGAGTCGGA GATTAAGAAT GCAGCCGTGT
GCCGATGCCT GA
 
Protein sequence
MSTRTPSSSS SRLMLTIGLC FLVALMEGLD LQAAGIAAGG IAQAFALDKM QMGWIFSAGI 
LGLLPGALVG GMLADRYGRK RILIGSVALF GLFSLATAIA WDFPSLVFAR LMTGVGLGAA
LPNLIALTSE AAGPRFRGTA VSLMYCGVPI GAALAATLGF AGANLAWQTV FWVGGVVPLI
LVPLLMRWLP ESAVFAGEKQ AAPPLRALFA PETATATLLL WLCYFFTLLV VYMLINWLPL
LLVEQGFQPS QAAGVMFALQ MGAASGTLML GALMDKLRPV TMSLLIYSGM LASLLALGTV
SSFNGMLLAG FVAGLFATGG QSVLYALAPL FYSSQIRATG VGTAVAVGRL GAMSGPLLAG
KMLALGTGTV GVMAASAPGI LVAGLAVFIL MSRRLRMQPC ADA