| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0373 |
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| Symbol | betA |
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| ID | 6967972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 377103 |
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| End bp | 378791 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643384428 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_002268943 |
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| Protein GI | 209399344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.868243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.338212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAATTTG ACTACATCAT TATTGGTGCC GGCTCAGCCG GCAACGTTCT CGCTACCCGT
CTGACTGAAG ATCCGAATAC CTCCGTGCTG CTGCTTGAAG CGGGCGGCCC GGACTATCGC
TTTGACTTCC GCACCCAGAT GCCCGCTGCC CTGGCATTCC CGCTACAGGG TAAACGCTAC
AACTGGGCTT ACGAGACGGA ACCTGAACCG TTTATGAATA ACCGTCGCAT GGAGTGCGGA
CGCGGTAAAG GCCTGGGTGG ATCGTCGCTG ATCAACGGCA TGTGCTATAT CCGTGGCAAC
GCGATGGATC TCGACAACTG GGCAAAAGAA CCCGGTCTGG AGAACTGGAG TTATCTCGAT
TGCCTGCCCT ACTACCGCAA GGCCGAGACC CGCGACGTGG GCGAGAACGA CTACCACGGC
GGCGACGGCC CGGTGAGCGT CACCACCTCC AAACCCGGCG TCAATCCGCT GTTTGAAGCG
ATGATTGAAG CGGGCGTGCA GGCGGGCTAC CCGCGCACGG ACGATCTCAA CGGTTATCAG
CAGGAAGGTT TCGGCCCGAT GGATCGCACC GTCACGCCGC AGGGCCGCCG CGCCAGCACC
GCGCGCGGTT ATCTCGATCA GGCCAAATCG CGCCCAAACC TAACCATTCG TACTCACGCC
ATGACCGATC ACATTATTTT TGACTGTAAA CGCGCGGTGG GCGTCGAGTG GCTGGAAGGC
GACAGCACCA TTCCGACCCG CGCGACGGCG AACAAAGAAG TGCTGTTATG TGCAGGCGCG
ATTGCCTCAC CGCAGATCCT GCAACGCTCT GGCGTCGGCA ACGCTGAACT GTTGGCCGAG
TTTGATATTC CGCTGGTGCA TGATTTACCC GGCGTCGGTG AAAATCTTCA GGATCATCTG
GAGATGTATC TGCAATATGA GTGCAAAGAA CCGGTTTCCC TCTACCCTGC CCTGCAGTGG
TGGAATCAGC CGAAAATCGG TGCGGAGTGG CTGTTTGGCG GCACCGGCGT TGGTGCCAGC
AACCACTTTG AAGCAGGCGG ATTTATTCGC AGCCGAGAGG AATTTGCGTG GCCGAATATT
CAGTATCACT TCCTGCCGGT AGCGATTAAC TATAACGGCT CGAATGCAGT GAAAGAGCAC
GGCTTCCAGT GCCACGTCGG CTCGATGCGC TCGCCAAGCC GTGGGCATGT GCGGATTAAA
TCCCGCGACC CGCACCAGCA TCCGGCAATT CTGTTTAACT ACATGTCGCA CGAACAGGAC
TGGCAGGAAT TCCGCGACGC AATTCGCATC ACCCGCGAGA TCATGCATCA ACCCGCGCTG
GATCAGTATC GTGGCCGCGA AATCAGCCCC GGCACGGAAT GTCAGACGGA TGAGCAGCTC
GATGAGTTTG TGCGTAACCA CGCCGAAACC GCCTTCCATC CGTGCGGTAC CTGCAAAATG
GGCTACGACG AGATGTCCGT GGTTGACGGC GAAGGCCGCG TGCATGGGCT GGAAGGCCTG
CGCGTGGTGG ATGCGTCAAT TATGCCGCAG ATTATCACCG GGAATTTGAA CGCCACGACG
ATTATGATTG GCGAGAAAAT GGCGGATATG ATTCGCGGGA AGGAAGCGTT GCCGAGGAGC
ACGGCGGGAT ATTTTGTGGC AAATGGGATG CCAGTAAGAG CGAAAAAAAT GAGTCGTGAT
TTGAACTGA
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| Protein sequence | MQFDYIIIGA GSAGNVLATR LTEDPNTSVL LLEAGGPDYR FDFRTQMPAA LAFPLQGKRY
NWAYETEPEP FMNNRRMECG RGKGLGGSSL INGMCYIRGN AMDLDNWAKE PGLENWSYLD
CLPYYRKAET RDVGENDYHG GDGPVSVTTS KPGVNPLFEA MIEAGVQAGY PRTDDLNGYQ
QEGFGPMDRT VTPQGRRAST ARGYLDQAKS RPNLTIRTHA MTDHIIFDCK RAVGVEWLEG
DSTIPTRATA NKEVLLCAGA IASPQILQRS GVGNAELLAE FDIPLVHDLP GVGENLQDHL
EMYLQYECKE PVSLYPALQW WNQPKIGAEW LFGGTGVGAS NHFEAGGFIR SREEFAWPNI
QYHFLPVAIN YNGSNAVKEH GFQCHVGSMR SPSRGHVRIK SRDPHQHPAI LFNYMSHEQD
WQEFRDAIRI TREIMHQPAL DQYRGREISP GTECQTDEQL DEFVRNHAET AFHPCGTCKM
GYDEMSVVDG EGRVHGLEGL RVVDASIMPQ IITGNLNATT IMIGEKMADM IRGKEALPRS
TAGYFVANGM PVRAKKMSRD LN
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