| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0251 |
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| Symbol | |
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| ID | 6970642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 264846 |
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| End bp | 266987 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643384321 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_002268837 |
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| Protein GI | 209399534 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.830075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCG GATTACGTTT CACGCTGGAA GTGGACGGCC TGCCACCGGA TGCTTTTGCG
GTGGTCTCCT TTCATCTGAA CCAGTCACTC TCTTCGCTTT TTTCCCTCGC TCTCTCTCTG
GTCAGCCAGC AGTTTCTCTC CCTTGAATTC CAGCAGATCC TCGACAAAAT GGCCTACCTG
ACGATATGGC AGGGCGATGA CGTACAGCGC CGGGTGAAAG GTGTGGTGAC CTGGTTTGAA
CTGGGGGAGA ACGACAAAAA CCAGAAGCTG TACAGCATGA AGGTATGCCC GCCGCTGTGG
CGCACAGGGC TGCGCCAGAA CTTCCGTATC TTCCAGAATG AGGACATCGC AAGCATCCTC
GGCACGATAT TGCAGGAAAA CGGGGTGACC GAGTGGAGCC CGCTGTTCAG CGAGCCACAT
CCTTCCCGTG AGTTTTGTGT CCAGTACGGT GAGACTGATT ACGATTTCCT GTGCCGGATG
GCGGCGGAGG AAGGCATCTT CTTTTATGAG GAGCACGCGC AAAAAAGTAC CGACCAGAGC
CTGGTCCTGT GCGATACCGT GCTTTATCTG CCGGAGTCCT TTGAGATCCC CTGGAATCCG
AACACCCGTA CCGAGGTAAG CACCCTCTGC ATCAGCCAGT TTCGCTACAG CGCACAAATC
CGCCCTTCTT CCGTGGTGAC CAAAGACTAC ACCTTTAAAC GCCCCGGCTG GGCCGGACGT
TTTGACCAGG AAGGCCAGCA CCAGGATTAC CAGCGCACAC AGTATGAAGT GTATGACTAT
CCCGGACGTT TCAAGGGCGC CCACGGGCAG AACTTTGCCC GCTGGCAGAT GGACGGCTGG
CGAAACAACG CAGAAGTGGC GCGCGGAACA AGCCGTTCGC CGGAGATATG GCCGGGACGG
CGAATTGTGC TGACGGGGCA TCCGCAGGCG AACCTGAACC GGGAATGGCA GGTGGTGGCA
AGTGAACTGC ACGGTGAGCA GCCGCAGGCG GTGCCGGGAC GCAGGGGTTC AGGCACCACG
CTGGATAACC ATTTTGCGGT AATACCGGCA GACAGAACAT GGCGACCACA GCCGTTGCTG
AAACCGCTGG TGGACGGCCC GCAGAGCGCC GTCGTGACGG GACCGGCAGG CGAGGAAATC
TTCTGTGATG AACATGGCCG CGTGCGGGTG AAATTTAACT GGGACCGCTA TAACCCGTCA
AACCAGGACA GTTCATGCTG GATCCGTGTG GCACAGGCGT GGGCAGGCAC CGGGTTTGGT
AACCTGGCGA TACCGCGTGT GGGTCAGGAG GTCATTGTGG ACTTCCTCAA CGGCGATCCG
GACCAGCCGA TCATTATGGG GCGTACCTAC CACCAGGAAA ACCGCACACC CGGTAGCCTG
CCGGGGACGA AGACGCAGAT GACCATTCGT TCGAAAACCT ATAAGGGCAG CGGGTTTAAT
GAACTGAAGT TTGACGATGC GACAGGGAAA GAACAGGTCT ACATCCACGC GCAGAAGAAC
ATGAACACCG AGGTGCTGAA TAACCGCACC ACGGATGTGA TAAACAACCA TGCCGAAAAA
ATAGGTAACA ACCAGGCGAT CACCGTTACC AATAACCAGA TCCTGAACAT TGGCGTTAAT
CAGATACAGA CGGTTGGTGT CAACCAGGTG GAAACGGTAG GCAGTAACCA GATTATCAAA
GTGGGATCAA ACCAGGTTGA AAAGGTGGGG ATCATTCGTG CGCTGACGGT GGGTGTGGCG
TATCAGACGA CGGTAGGCGG CATTATGAAT ACCTCGGTGG CGTTGTTGCA GTCCTCACAG
GTAGGGCTGC ATAAATCACT GATGGTGGGA ATGGGCTACA GCGTCAATGT AGGGAATAAC
GTCACCTTCT CGGTGGGCAA GACGATGAAG GAAAACACCG GACAAACAGC AGTTTATTCT
GCCGGTGAGC ATCTTGAACT CTGCTGTGGT AAGGCAAGGC TGGTGCTGAC GAAGGACGGA
AGCATATTTC TTAATGGTAC GCACATTCAT CTGGAAGGGG AGTCGGATGT GAACGGTGAT
GCGCCGGTGA TTAACTGGAA CTGTGGTGCC ACACAACCTG TACCGGATGC GCCTGTGCCG
AAAGATTTAC CCCCCGGAAT GCCGGATATG CGGCAATTTT GA
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| Protein sequence | MSTGLRFTLE VDGLPPDAFA VVSFHLNQSL SSLFSLALSL VSQQFLSLEF QQILDKMAYL
TIWQGDDVQR RVKGVVTWFE LGENDKNQKL YSMKVCPPLW RTGLRQNFRI FQNEDIASIL
GTILQENGVT EWSPLFSEPH PSREFCVQYG ETDYDFLCRM AAEEGIFFYE EHAQKSTDQS
LVLCDTVLYL PESFEIPWNP NTRTEVSTLC ISQFRYSAQI RPSSVVTKDY TFKRPGWAGR
FDQEGQHQDY QRTQYEVYDY PGRFKGAHGQ NFARWQMDGW RNNAEVARGT SRSPEIWPGR
RIVLTGHPQA NLNREWQVVA SELHGEQPQA VPGRRGSGTT LDNHFAVIPA DRTWRPQPLL
KPLVDGPQSA VVTGPAGEEI FCDEHGRVRV KFNWDRYNPS NQDSSCWIRV AQAWAGTGFG
NLAIPRVGQE VIVDFLNGDP DQPIIMGRTY HQENRTPGSL PGTKTQMTIR SKTYKGSGFN
ELKFDDATGK EQVYIHAQKN MNTEVLNNRT TDVINNHAEK IGNNQAITVT NNQILNIGVN
QIQTVGVNQV ETVGSNQIIK VGSNQVEKVG IIRALTVGVA YQTTVGGIMN TSVALLQSSQ
VGLHKSLMVG MGYSVNVGNN VTFSVGKTMK ENTGQTAVYS AGEHLELCCG KARLVLTKDG
SIFLNGTHIH LEGESDVNGD APVINWNCGA TQPVPDAPVP KDLPPGMPDM RQF
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