Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0227 |
Symbol | dnaQ |
ID | 6967060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 239600 |
End bp | 240331 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643384301 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_002268818 |
Protein GI | 209400894 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.302916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTG CAATTACACG CCAGATCGTT CTCGATACCG AAACCACCGG TATGAACCAG ATTGGTGCGC ACTATGAAGG CCACAAGATC ATTGAGATTG GTGCCGTTGA AGTGGTGAAC CGTCGCCTGA CGGGCAATAA CTTCCATGTT TATCTCAAAC CCGATCGGCT GGTGGATCCG GAAGCCTTTG GCGTACATGG TATTGCCGAT GAATTTTTGC TCGATAAGCC CACGTTTGCC GAAGTAGCCG ATGAGTTCAT GGACTATATC CGCGGCGCGG AGTTGGTGAT CCATAACGCA GCGTTCGATA TCGGCTTTAT GGACTACGAG TTCTCGTTGC TTAAGCGCGA TATTCCGAAG ACTAATACCT TCTGTAAGGT CACCGATAGC CTTGCGGTGG CGAGGAAAAT GTTTCCCGGT AAACGCAACA GCCTCGATGC GTTATGTGCC CGCTACGAAA TAGATAACAG TAAACGAACG CTGCACGGGG CATTACTCGA TGCCCAGATC CTTGCGGAAG TTTATCTGGC GATGACCGGT GGTCAAACGT CGATGGCTTT TGCGATGGAA GGAGAGACAC AACAGCAACA AGGTGAAGCA ACAATCCAGC GCCTTGTACG TCAGGCAAGT AAGTTACGCG TTGTTTTTGC GACAGATGAA GAGCTTGCAG CACATGAAGC CCGTCTCGAT CTGGTGCAGA AAAAGGGCGG AAGCTGCCTC TGGCGGGCAT AA
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Protein sequence | MSTAITRQIV LDTETTGMNQ IGAHYEGHKI IEIGAVEVVN RRLTGNNFHV YLKPDRLVDP EAFGVHGIAD EFLLDKPTFA EVADEFMDYI RGAELVIHNA AFDIGFMDYE FSLLKRDIPK TNTFCKVTDS LAVARKMFPG KRNSLDALCA RYEIDNSKRT LHGALLDAQI LAEVYLAMTG GQTSMAFAME GETQQQQGEA TIQRLVRQAS KLRVVFATDE ELAAHEARLD LVQKKGGSCL WRA
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