Gene ECH74115_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0152 
SymbolpcnB 
ID6969097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp162032 
End bp163396 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content56% 
IMG OID643384229 
Productpoly(A) polymerase I 
Protein accessionYP_002268752 
Protein GI209398537 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR01942] poly(A) polymerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000005693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAAGCC GCGAGGAAAG CGAGGCTGAA CAGGCAGTCG CCCGTCCACA GGTGACGGTG 
ATCCCGCGTG AGCAGCATGC TATTTCCCGC AAAGATATCA GTGAAAATGC CCTGAAGGTA
ATGTACAGGC TCAATAAAGC GGGATACGAA GCCTGGCTGG TTGGCGGCGG CGTGCGCGAC
CTGTTACTCG GCAAAAAGCC GAAAGATTTT GACGTAACCA CTAACGCCAC GCCTGAGCAG
GTGCGCAAAC TGTTCCGTAA CTGCCGCCTG GTGGGTCGCC GTTTCCGTCT GGCTCATGTG
ATGTTTGGCC CGGAGATTAT CGAAGTTGCG ACCTTCCGTG GACACCACGA AGGTAACGTC
AGCGACCGCA CGACCTCCCA ACGCGGGCAA AACGGCATGT TGCTGCGCGA CAACATTTTC
GGCTCCATCG AAGAAGACGC CCAGCGCCGC GATTTCACTA TCAACAGCCT GTATTACAGC
GTAGCGGATT TTACCGTCCG TGATTACGTT GGCGGTATGA AGGATCTGAA GGACGGTGTT
ATCCGTCTGA TTGGTAACCC GGAAACGCGC TACCGTGAAG ATCCGGTACG TATGCTGCGC
GCAGTACGTT TTGCCGCCAA ATTGGGTATG CGCATCAGCC CGGAAACCGC AGAACCGATC
CCTCGCCTCG CTACCCTGCT GAACGATATC CCACCGGCAC GCCTGTTTGA AGAATCGCTT
AAACTGCTAC AAGCGGGCTA CGGTTACGAA ACCTATAAGC TGTTGTGTGA ATATCATCTG
TTCCAGCCGC TGTTCCCGAC CATTACCCGC TACTTCACGG AAAATGGCGA CAGCCCGATG
GAGCGGATCA TTGAACAGGT GCTGAAGAAT ACCGATACGC GTATCCATAA CGATATGCGC
GTGAACCCGG CGTTCCTGTT TGCCGCCATG TTCTGGTACC CACTGCTGGA GACGGCACAG
AAGATCGCCC AGGAAAGCGG CCTGACCTAT CACGACGCTT TCGCGCTGGC GATGAACGAC
GTGCTGGACG AAGCCTGCCG TTCACTGGCA ATCCCGAAAC GTCTGACGAC GTTAACCCGC
GATATCTGGC AGTTGCAGTT GCGTATGTCC CGACGTCAGG GTAAACGCGC ATGGAAATTG
CTGGAGCATC CTAAGTTCCG TGCGGCTTAT GACCTGTTGG CCTTGCGAGC TGAAGTTGAG
CGTAACGCTG AACTGCAGCG TCTGGTGAAA TGGTGGGGTG AGTTCCAGGT TTCCGCGCCA
CCAGACCAAA AAGGGATGCT CAACGAGCTG GATGAAGAAC CGTCACCGCG TCGTCGTACT
CGTCGTCCAC GCAAACGCGC ACCACGTCGT GAGGGTACCG CATGA
 
Protein sequence
MLSREESEAE QAVARPQVTV IPREQHAISR KDISENALKV MYRLNKAGYE AWLVGGGVRD 
LLLGKKPKDF DVTTNATPEQ VRKLFRNCRL VGRRFRLAHV MFGPEIIEVA TFRGHHEGNV
SDRTTSQRGQ NGMLLRDNIF GSIEEDAQRR DFTINSLYYS VADFTVRDYV GGMKDLKDGV
IRLIGNPETR YREDPVRMLR AVRFAAKLGM RISPETAEPI PRLATLLNDI PPARLFEESL
KLLQAGYGYE TYKLLCEYHL FQPLFPTITR YFTENGDSPM ERIIEQVLKN TDTRIHNDMR
VNPAFLFAAM FWYPLLETAQ KIAQESGLTY HDAFALAMND VLDEACRSLA IPKRLTTLTR
DIWQLQLRMS RRQGKRAWKL LEHPKFRAAY DLLALRAEVE RNAELQRLVK WWGEFQVSAP
PDQKGMLNEL DEEPSPRRRT RRPRKRAPRR EGTA