| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0078 |
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| Symbol | leuD |
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| ID | 6972252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 83436 |
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| End bp | 84041 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643384156 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_002268679 |
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| Protein GI | 209397741 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA AATTTATCAA ACACACAGGC CTGGTGGTTC CGCTGGATGC CGCCAATGTC
GATACCGATG CAATCATCCC GAAACAGTTT TTGCAGAAAG TGACCCGTAC TGGTTTTGGC
GCGCATCTGT TTAACGACTG GCGTTTTCTG GATGAAAAAG GCCAACAGCC AAACCCGGAC
TTCGTGCTGA ACTTCTCGCA GTATCAGGGC GCTTCCATTT TGCTGGCACG AGAAAACTTC
GGCTGTGGCT CCTCGCGTGA GCACGCGCCC TGGGCATTGA CCGACTACGG TTTTAAGGTG
GTGATTGCGC CGAGTTTTGC TGACATCTTC TACGGCAATA GCTTTAACAA CCAGCTGCTG
CCGGTGAAAT TAAGCGACGC AGAAGTGGAT GAGCTGTTTG CGCTGGTGAA AGCCAATCCG
GGGATTCATT TTGATGTAGA CCTGGAAGCG CAAGAGGTGA AAGCGGGTGA GAAAACCTAT
CGCTTTACCA TTGATGCCTT CCGCCGCCAC TGCATGATGA ACGGTCTGGA CAGCATTGGG
CTTACCTTGC AGCACGACGA CGCCATTGCG GCTTATGAAG CGAAGCAACC CGCGTTTATG
CGTTAG
|
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| Protein sequence | MAEKFIKHTG LVVPLDAANV DTDAIIPKQF LQKVTRTGFG AHLFNDWRFL DEKGQQPNPD
FVLNFSQYQG ASILLARENF GCGSSREHAP WALTDYGFKV VIAPSFADIF YGNSFNNQLL
PVKLSDAEVD ELFALVKANP GIHFDVDLEA QEVKAGEKTY RFTIDAFRRH CMMNGLDSIG
LTLQHDDAIA AYEAKQPAFM R
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