| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0064 |
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| Symbol | rapA |
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| ID | 6966907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 65271 |
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| End bp | 68030 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643384144 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_002268667 |
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| Protein GI | 209397603 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.694047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGCG TGATGTTCAA CCCTGGTGAT ACCATTACCA GCCATGACGG CTGGCAGATG
CAAGTCGAAG AAGTAAAAGA AGAAAATGGC TTGCTGACCT ATATCGGTAC TCGCCTGGAT
ACTGAAGAGT CCGGCGTAGC CCTGCGTGAA GTTTTCCTTG ATAGCAAACT GGTGTTCAGC
AAACCGCAGG ACCGCCTGTT TGCCGGGCAG ATTGACCGTA TGGACCGCTT TGCGCTGCGT
TATCGCGCGC GTAAGTATTC CAGCGAACAG TTCCGTATGC CGTACAGCGG CCTGCGCGGT
CAGCGTACCA GCCTGATCCC GCACCAGCTC AACATCGCTC ATGATGTTGG CCGCCGCCAC
GCGCCGCGCG TCCTGCTGGC TGACGAAGTG GGTTTAGGGA AAACCATTGA AGCCGGGATG
ATCCTTCATC AGCAACTGCT CTCTGGCGCT GCTGAACGTG TGCTGATTAT CGTCCCGGAA
ACCTTACAGC ATCAGTGGCT GGTAGAAATG CTGCGCCGTT TCAACCTGCG CTTTGCGCTG
TTTGATGATG AGCGTTATGC CGAAGCTCAG CACGATGCTT ACAACCCGTT CGACACCGAA
CAGCTGGTGA TTTGCTCGCT GGATTTTGCC CGCCGTAGCA AACAGCGTCT GGAACATCTC
TGTGAAGCCG AGTGGGACCT GCTGGTGGTC GATGAAGCGC ATCACCTGGT GTGGAGCGAA
GACGCGCCGA GCCGCGAATA TCAGGCTATT GAACAACTGG CAGAGCACGT GCCGGGCGTT
CTGCTGCTGA CCGCAACCCC GGAACAGCTG GGAATGGAAA GCCACTTCGC CCGTCTGCGT
CTGCTGGACC CGAACCGTTT CCACGATTTC GCGCAATTCG TTGAAGAGCA GAAAAATTAT
CGTCCAGTAG CGGACGCCGT TGCCATGCTG CTGGCAGGTA ACAAACTGAG CAATGACGAA
CTGAACATGC TTGGCGAGAT GATCGGCGAG CAGGATATCG AGCCGCTGTT GCAAGCAGCA
AACAGCGACA GCGAAGATGC CCAGAGCGCC CGTCAGGAGC TGGTTTCGAT GCTGATGGAT
CGCCACGGCA CCAGCCGCGT GCTGTTCCGT AACACCCGTA ACGGTGTGAA AGGCTTCCCG
AAACGCGAGC TGCACACCAT TAAGCTGCCG CTACCGACGC AGTATCAGAC GGCTATTAAA
GTCTCCGGCA TTATGGGCGC ACGTAAAAGT GCGGAAGACC GCGCCCGCGA TATGCTCTAC
CCGGAGCGTA TTTATCAGGA ATTTGAAGGT GATAACGCCA CCTGGTGGAA CTTCGATCCG
CGCGTTGAGT GGCTGATGGG CTACCTGACC AGCCATCGCT CTCAGAAAGT GCTGGTGATC
TGCGCTAAAG CTGCCACTGC GCTGCAACTG GAGCAAGTAC TGCGCGAACG TGAAGGTATT
CGCGCTGCGG TGTTCCACGA AGGTATGTCG ATTATCGAAC GTGACCGCGC TGCCGCCTGG
TTTGCCGAAG AAGACACCGG CGCACAGGTA CTGCTGTGCT CAGAAATCGG TTCTGAAGGA
CGTAACTTCC AGTTCGCCAG CCACATGGTG ATGTTTGACC TGCCATTCAA CCCGGATCTA
CTGGAGCAGC GTATTGGTCG TCTGGATCGT ATCGGCCAAG CGCACGATAT TCAGATCCAT
GTGCCTTATC TGGAGAAAAC CGCTCAGTCG GTGCTGGTGC GCTGGTATCA CGAAGGTCTG
GATGCATTTG AGCACACCTG CCCGACCGGA CGCACTATTT ACGATAGCGT ATACAACGAT
CTGATTAACT ATCTGGCTTC ACCGGATCAA ACCGAAGGCT TTGACGATCT GATCAAAAAC
TGCCGCGAGC AACATGAAGC GCTGAAAGCA CAGCTGGAAC AGGGTCGTGA CCGCCTGCTG
GAAATCCACT CCAACGGTGG CGAAAAAGCC CAGGCACTGG CAGAAAGCAT TGAAGAGCAG
GATGACGATA CCAACCTGAT CGCCTTCGCC ATGAACCTGT TCGATATTAT CGGTATCAAT
CAGGACGATC GCGGCGACAA CATGATCGTG CTGACGCCGT CCGATCATAT GCTGGTGCCG
GACTTCCCTG GCCTGTCGGA AGATGGCATC ACCATCACCT TTGATCGTGA AGTGGCGCTG
GCGCGTGAAG ATGCGCAGTT TATTACCTGG GAACATCCGC TGATCCGCAA CGGTCTGGAT
CTGATTCTTT CTGGCGATAC CGGTAGCAGC ACGATTTCAC TGTTAAAAAA CAAAGCGTTG
CCGGTAGGTA CGCTGTTGGT GGAACTGATT TATGTGGTTG AAGCCCAGGC TCCGAAGCAG
TTGCAGCTCA ACCGCTTCCT GCCACCGACG CCGGTACGTA TGCTGCTGGA TAAAAACGGC
AACAACCTGG CGGCGCAGGT AGAGTTTGAA ACCTTTAACC GCCAGCTTAA CGCGGTTAAC
CGTCACACCG GCAGCAAACT GGTTAACGCC GTGCAGCAGG ATGTTCACGC TATCCTTCAA
CTGGGTGAAG CGCAGATCGA GAAATCTGCC CGTGCATTGA TTGATGCAGC ACGTAACGAA
GCCGACGAAA AACTGTCTGC CGAGCTGTCT CGTCTGGAAG CTCTGCGTGC AGTGAACCCG
AACATTCGTG ACGACGAACT GACCGCCATT GAGAGCAACC GTCAGCAGGT AATGGAAAGC
CTGGATCAGG CAGGTTGGCG TCTGGATGCC CTGCGTTTGA TCGTTGTAAC GCATCAGTAA
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| Protein sequence | MTRVMFNPGD TITSHDGWQM QVEEVKEENG LLTYIGTRLD TEESGVALRE VFLDSKLVFS
KPQDRLFAGQ IDRMDRFALR YRARKYSSEQ FRMPYSGLRG QRTSLIPHQL NIAHDVGRRH
APRVLLADEV GLGKTIEAGM ILHQQLLSGA AERVLIIVPE TLQHQWLVEM LRRFNLRFAL
FDDERYAEAQ HDAYNPFDTE QLVICSLDFA RRSKQRLEHL CEAEWDLLVV DEAHHLVWSE
DAPSREYQAI EQLAEHVPGV LLLTATPEQL GMESHFARLR LLDPNRFHDF AQFVEEQKNY
RPVADAVAML LAGNKLSNDE LNMLGEMIGE QDIEPLLQAA NSDSEDAQSA RQELVSMLMD
RHGTSRVLFR NTRNGVKGFP KRELHTIKLP LPTQYQTAIK VSGIMGARKS AEDRARDMLY
PERIYQEFEG DNATWWNFDP RVEWLMGYLT SHRSQKVLVI CAKAATALQL EQVLREREGI
RAAVFHEGMS IIERDRAAAW FAEEDTGAQV LLCSEIGSEG RNFQFASHMV MFDLPFNPDL
LEQRIGRLDR IGQAHDIQIH VPYLEKTAQS VLVRWYHEGL DAFEHTCPTG RTIYDSVYND
LINYLASPDQ TEGFDDLIKN CREQHEALKA QLEQGRDRLL EIHSNGGEKA QALAESIEEQ
DDDTNLIAFA MNLFDIIGIN QDDRGDNMIV LTPSDHMLVP DFPGLSEDGI TITFDREVAL
AREDAQFITW EHPLIRNGLD LILSGDTGSS TISLLKNKAL PVGTLLVELI YVVEAQAPKQ
LQLNRFLPPT PVRMLLDKNG NNLAAQVEFE TFNRQLNAVN RHTGSKLVNA VQQDVHAILQ
LGEAQIEKSA RALIDAARNE ADEKLSAELS RLEALRAVNP NIRDDELTAI ESNRQQVMES
LDQAGWRLDA LRLIVVTHQ
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