Gene ECH74115_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0024 
Symbol 
ID6968355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp22495 
End bp23028 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content39% 
IMG OID643384105 
Productputative fimbrial protein 
Protein accessionYP_002268628 
Protein GI209396234 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000141293 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT ATATTATTCC CTTCGTTGCG ACAACGTTGA TGTTTAGCGC AACAACCTTC 
GCCAAGGATG TCGATCAAGG AACACTAACC ATTAGAGGAG AAGTTGTTGA TACAACGTGT
TACTTTGTTA ATGGTGATTC GACAACAGAT ATCGTTGTCG AAGATGTTGT AACCAGTGCA
ATGAATCAAC TTATCAATAA TGAAATCTAT ACTTTAAAAA CCGGTTCAAC CTCTCATGAC
TTAGAAATTC AGTGTGACGG AAATACAGCC CCAAGTATCG AAGTACTAGC ATCAGAGTTT
GATGCTAATA ACTTTACGCT GAATAAAGGA ACTGCTGAGA ACATTGGCTT TGCCATTTTC
CTCGATGATG GGACTTTGAC CAGAATGAGA CCAGGGTTAA AAACACCGCT GAAAGATAAT
GGCTCTGGTC AATATTTTCT CAATTTAAAT GCACAATATG CCCGCACAAG TGGCAATCCT
GTTACAAAAG GCTCCGTAGA GTCAACCGTA ACGATTAAAA TCAGTGCAGA TTAA
 
Protein sequence
MKKYIIPFVA TTLMFSATTF AKDVDQGTLT IRGEVVDTTC YFVNGDSTTD IVVEDVVTSA 
MNQLINNEIY TLKTGSTSHD LEIQCDGNTA PSIEVLASEF DANNFTLNKG TAENIGFAIF
LDDGTLTRMR PGLKTPLKDN GSGQYFLNLN AQYARTSGNP VTKGSVESTV TIKISAD