| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0008 |
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| Symbol | agcS |
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| ID | 6972052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 6546 |
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| End bp | 7976 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643384092 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_002268615 |
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| Protein GI | 209398740 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.248678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATT TTTTCTCCTT TATTAACAGC GTCCTTTGGG GATCGGTAAT GATTTACCTG
CTCTTCGGCG CAGGTTGTTG GTTCACTTTT CGCACCGGAT TTGTGCAGTT TCGCTACATC
CGCCAGTTTG GCAAAAGTCT TAAAAATAGC ATTCATCCAC AGCCAGGCGG TTTAACCTCA
TTTCAGTCAT TGTGTACCAG TCTTGCGGCG CGCGTGGGTA GCGGCAACCT GGCCGGCGTT
GCGCTGGCTA TTACCGCCGG TGGACCTGGA GCCGTCTTTT GGATGTGGGT TGCCGCGTTT
ATCGGCATGG CGACCTCGTT TGCCGAATGT TCCCTTGCAC AACTTTATAA AGAACGTGAC
GTCAATGGGC AGTTTCGTGG CGGACCGGCA TGGTATATGG CGCGCGGGCT GGGGATGCGC
TGGATGGGCG TTCTGTTCGC CGTCTTTTTG CTCATCGCCT ACGGCATAAT TTTCAGCGGA
GTTCAGGCAA ACGCTGTTGC CCGAGCTCTG AGTTTTTCTT TTGATTTTCC CCCGCTGGTG
ACAGGCATTA TTCTTGCTGT CTTTGCTCTG CTGGCAATCA TTCGCGGTCT TCATGGCGTC
GCCCGGCTCA TGCAGGGGTT TGTCCCGTTG ATGGCGATAA TCTGGGTACT GACCAGCCTG
GTGATTTGCG TAATAAATAT CGGGCAACTT CCCCACGTCA TTTGGTCTAT TTTTGAGAGT
GCTTTTGGCT GGCAGGAAGC GGCAGGCGGC GCGGCGGGAT ATACCTTAAG CCAGGCGATT
ACTAACGGTT TTCAGCGCAG TATGTTTTCC AATGAGGCGG GAATGGGGTC GACGCCAAAC
GCGGCAGCGG CAGCGGCGTC CTGGCCTCCG CATCCGGCAG CGCAAGGAAT TGTCCAGATG
ATTGGCATTT TTATCGACAC CCTGGTCATC TGTACGGCAA GCGCCATGCT GATATTACTG
GCGGGTAACG GCACAACCTA CATGCCGCTG GAAGGTATTC AGCTTATCCA GAAGGCGATG
CGGGTGCTAA TGGGTTCCTG GGGTGCTGAA TTTGTTACCC TCGTGGTTAT TCTGTTTGCC
TTCAGCTCCA TCGTTGCCAA CTACATTTAT GCCGAAAACA ATCTCTTCTT TTTACGCCTG
AACAACCCTA AAGCGATCTG GTGTTTGCGG ATCTGCACCT TCGCAACGGT CATCGGCGGC
ACCTTGCTAA GTCTTCCGCT GATGTGGCAA CTGGCAGATA TCATAATGGC CTGCATGGCT
ATTACCAATT TGACTGCCAT ATTACTGCTC TCGCCTGTGG TTTATACCAT TGCCAGTGAT
TATCTACGCC AGCGTAAACT CGGCGTGCGC CCGGTGTTTG ATCCGTTGCG TTATCCGGAT
ATCGGTCGCC AGCTTTCTCG GGACGCGTGG GATGATGTTT CGCAGGAGTA A
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| Protein sequence | MPDFFSFINS VLWGSVMIYL LFGAGCWFTF RTGFVQFRYI RQFGKSLKNS IHPQPGGLTS
FQSLCTSLAA RVGSGNLAGV ALAITAGGPG AVFWMWVAAF IGMATSFAEC SLAQLYKERD
VNGQFRGGPA WYMARGLGMR WMGVLFAVFL LIAYGIIFSG VQANAVARAL SFSFDFPPLV
TGIILAVFAL LAIIRGLHGV ARLMQGFVPL MAIIWVLTSL VICVINIGQL PHVIWSIFES
AFGWQEAAGG AAGYTLSQAI TNGFQRSMFS NEAGMGSTPN AAAAAASWPP HPAAQGIVQM
IGIFIDTLVI CTASAMLILL AGNGTTYMPL EGIQLIQKAM RVLMGSWGAE FVTLVVILFA
FSSIVANYIY AENNLFFLRL NNPKAIWCLR ICTFATVIGG TLLSLPLMWQ LADIIMACMA
ITNLTAILLL SPVVYTIASD YLRQRKLGVR PVFDPLRYPD IGRQLSRDAW DDVSQE
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