Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_04080 |
Symbol | cycA |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 4343228 |
End bp | 4344640 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | D-alanine/D-serine/glycine transporter |
Protein accession | ACT45869 |
Protein GI | 253980199 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000357991 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGATC AGGTAAAAGT CGTTGCCGAT GATCAGGCTC CGGCTGAACA GTCGCTACGG CGCAATCTCA CAAACCGACA TATTCAGCTT ATTGCCATTG GCGGTGCCAT TGGTACGGGG TTGTTTATGG GGTCTGGCAA AACGATTAGC CTTGCCGGGC CGTCGATCAT TTTCGTTTAT ATGATCATCG GTTTTATGCT CTTTTTCGTG ATGCGGGCAA TGGGGGAATT GCTGCTTTCG AATCTGGAAT ACAAATCTTT TAGTGACTTC GCTTCCGATT TACTCGGGCC GTGGGCAGGA TATTTCACCG GCTGGACTTA CTGGTTCTGC TGGGTTGTAA CCGGTATGGC AGACGTGGTG GCGATCACTG CTTATGCTCA GTTCTGGTTC CCCGATCTCT CCGACTGGGT CGCCTCGCTG GCGGTGATAG TGCTGCTGTT GACGCTCAAC CTTGCCACCG TGAAAATGTT CGGTGAGATG GAGTTCTGGT TTGCGATGAT CAAAATCGTC GCCATCGTGT CGCTGATTGT CGTCGGCCTG GTCATGGTGG CGATGCACTT TCAGTCACCG ACCGGTGTGG AAGCGTCATT CGCGCATTTG TGGAATGACG GCGGCTGGTT CCCGAAAGGT TTAAGTGGCT TCTTTGCCGG ATTCCAGATA GCGGTTTTCG CTTTCGTGGG GATTGAGCTG GTAGGTACAA CAGCTGCGGA AACCAAAGAT CCGGAGAAAT CACTGCCACG CGCGATTAAC TCCATTCCGA TCCGTATCAT TATGTTCTAC GTCTTCGCGC TGATTGTGAT TATGTCCGTG ACGCCGTGGA GTTCGGTAGT CCCGGAGAAA AGCCCGTTTG TTGAACTGTT CGTGTTGGTA GGGCTGCCTG CTGCCGCAAG CGTGATCAAC TTTGTGGTGC TGACCTCTGC GGCGTCTTCC GCTAACAGCG GCGTCTTCTC TACCAGCCGT ATGCTGTTTG GTCTGGCGCA GGAAGGTGTG GCACCGAAAG CGTTCGCTAA ACTTTCTAAG CGCGCAGTAC CAGCGAAAGG GCTGACCTTC TCCTGCATCT GCCTGCTCGG TGGCGTGGTG ATGCTGTATG TGAATCCTAG CGTGATTGGC GCGTTCACGA TGATTACAAC CGTTTCCGCG ATTCTGTTTA TGTTCGTCTG GACGATTATC CTTTGCTCGT ACCTGGTTTA CCGCAAACAG CGTCCTCATC TGCATGAGAA GTCGATCTAC AAGATGCCGC TCGGCAAGCT GATGTGCTGG GTATGTATGG CGTTCTTTGT GTTCGTGGTC GTGTTGCTGA CACTGGAAGA TGACACTCGC CAGGCGCTGT TGGTCACCCC GCTGTGGTTT ATCGCACTGG GGCTGGGCTG GTTGTTTATT GGTAAGAAGC GGGCTGCTGA ACTGCGGAAA TAA
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Protein sequence | MVDQVKVVAD DQAPAEQSLR RNLTNRHIQL IAIGGAIGTG LFMGSGKTIS LAGPSIIFVY MIIGFMLFFV MRAMGELLLS NLEYKSFSDF ASDLLGPWAG YFTGWTYWFC WVVTGMADVV AITAYAQFWF PDLSDWVASL AVIVLLLTLN LATVKMFGEM EFWFAMIKIV AIVSLIVVGL VMVAMHFQSP TGVEASFAHL WNDGGWFPKG LSGFFAGFQI AVFAFVGIEL VGTTAAETKD PEKSLPRAIN SIPIRIIMFY VFALIVIMSV TPWSSVVPEK SPFVELFVLV GLPAAASVIN FVVLTSAASS ANSGVFSTSR MLFGLAQEGV APKAFAKLSK RAVPAKGLTF SCICLLGGVV MLYVNPSVIG AFTMITTVSA ILFMFVWTII LCSYLVYRKQ RPHLHEKSIY KMPLGKLMCW VCMAFFVFVV VLLTLEDDTR QALLVTPLWF IALGLGWLFI GKKRAAELRK
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