Gene ECD_04078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_04078 
SymbolytfB 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4341442 
End bp4342080 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID 
Productpredicted cell envelope opacity-associated protein 
Protein accessionACT45867 
Protein GI253980197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000081403 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGGGC GCTTTGAACT AAAACCAACC CTGGAGAAAG TCTGGCACGC GCCGGACAAT 
TTTCGCTTCA TGGACCCGCT GCCGCCGATG CATCGTCGGG GGATCATTAT TGCCGCCATT
ATATTGGTGG TCGGATTTCT GCTTCCATCT GATGATACGC CCAACGCGCC GGTGGTGACG
CGTGAAGCGC AGTTAGATAT TCAGTCGCAA TCACAACCGC CGACAGAAGA ACAGCTGCGG
GCGCAATTAG TCACACCACA AAATGATCCT GATCAGGTGG CTCCGGTCGC TCCAGAACCT
ATACAGGAAG GCCAGCCAGA AGAACAGCCG CAAACTACCC AAACACAACC ATTCCAGCCA
GATAGCGGAA TTGATAATCA ATGGCGCTCT TACCGTGTCG AACCCGGTAA AACGATGGCG
CAGCTGTTCC GCGACCACGG ACTGCCCGCT ACCGATGTCT ATGCAATGGC GCAGGTAGAA
GGCGCGGGTA AGCCGCTGAG TAATTTGCAA AACGGGCAAA TGGTGAAAAT CCGCCAGAAC
GCCAGCGGCG TGGTGACGGG CTTAACCATT GATACGGGGA ATAATCAACA GGTCCTGTTC
ACCCGCCAGC CGGATGGCAG TTTTATTCGT GCGCGGTAG
 
Protein sequence
MPGRFELKPT LEKVWHAPDN FRFMDPLPPM HRRGIIIAAI ILVVGFLLPS DDTPNAPVVT 
REAQLDIQSQ SQPPTEEQLR AQLVTPQNDP DQVAPVAPEP IQEGQPEEQP QTTQTQPFQP
DSGIDNQWRS YRVEPGKTMA QLFRDHGLPA TDVYAMAQVE GAGKPLSNLQ NGQMVKIRQN
ASGVVTGLTI DTGNNQQVLF TRQPDGSFIR AR