Gene ECD_04038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_04038 
SymbolmiaA 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4305772 
End bp4306722 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content53% 
IMG OID 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionACT45827 
Protein GI253980157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0926382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA TCAGTAAGGC GAGCCTGCCT AAGGCGATTT TTTTGATGGG GCCGACGGCC 
TCCGGTAAAA CGGCGTTAGC CATTGAGCTG CGTAAAATTT TACCAGTAGA GTTGATAAGC
GTTGATTCTG CCCTTATTTA CAAAGGGATG GATATCGGGA CGGCGAAGCC GAACGCTGAA
GAGTTACTCG CCGCGCCGCA CCGATTGCTG GATATTCGCG ATCCGTCGCA GGCTTACTCG
GCTGCTGATT TTCGCCGCGA TGCGCTGGCG GAAATGGCCG ATATCACCGC GGCGGGGCGG
ATCCCACTGT TAGTGGGCGG TACGATGTTG TATTTCAAGG CATTGCTGGA AGGGTTGTCG
CCGCTACCGT CGGCAGACCC GGAAGTACGG GCCAGAATTG AGCAACAGGC GGCAGAGCAA
GGTTGGGAGT CATTGCATCG TCAACTTCAG GAGGTAGATC CGGTTGCGGC AGCAAGGATT
CATCCAAATG ATCCACAAAG GCTTTCCCGG GCACTGGAAG TTTTTTTCAT TTCGGGTAAA
ACTTTAACGG AACTGACGCA AACGTCAGGA GACGCTCTAC CGTATCAGGT GCATCAGTTC
GCCATCGCCC CGGCGAGCCG TGAACTGCTC CATCAACGCA TTGAGCAGCG TTTTCATCAG
ATGTTGGCTT CAGGTTTTGA AGCAGAAGTC CGGGCGCTTT TTGCCCGAGG AGATTTGCAT
ACGGACTTGC CTTCCATTCG TTGCGTGGGT TATCGCCAGA TGTGGTCTTA CCTTGAAGGC
GAAATCTCAT ACGATGAAAT GGTTTATCGA GGTGTTTGCG CCACGAGACA GTTGGCGAAG
CGGCAGATAA CCTGGCTGCG TGGTTGGGAA GGGGTTCACT GGCTTGACAG TGAAAAACCA
GAACAGGCGC GTGACGAAGT ATTACAGGTT GTTGGTGCTA TCGCAGGCTG A
 
Protein sequence
MSDISKASLP KAIFLMGPTA SGKTALAIEL RKILPVELIS VDSALIYKGM DIGTAKPNAE 
ELLAAPHRLL DIRDPSQAYS AADFRRDALA EMADITAAGR IPLLVGGTML YFKALLEGLS
PLPSADPEVR ARIEQQAAEQ GWESLHRQLQ EVDPVAAARI HPNDPQRLSR ALEVFFISGK
TLTELTQTSG DALPYQVHQF AIAPASRELL HQRIEQRFHQ MLASGFEAEV RALFARGDLH
TDLPSIRCVG YRQMWSYLEG EISYDEMVYR GVCATRQLAK RQITWLRGWE GVHWLDSEKP
EQARDEVLQV VGAIAG