Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03993 |
Symbol | fumB |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 4252760 |
End bp | 4254406 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | anaerobic class I fumarate hydratase (fumarase B) |
Protein accession | ACT45783 |
Protein GI | 253980113 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACA AACCCTTTAT CTACCAGGCA CCTTTCCCGA TGGGGAAAGA CAATACCGAA TACTATCTAC TCACTTCCGA TTACGTTAGC GTTGCCGACT TCGACGGCGA AACCATCCTG AAAGTGGAAC CAGAAGCCCT GACCCTGCTG GCGCAGCAAG CCTTTCACGA CGCTTCTTTT ATGCTCCGTC CGGCACACCA GAAACAGGTT GCGGCTATTC TTCACGATCC AGAAGCCAGC GAAAACGACA AGTACGTGGC GCTGCAATTC TTAAGAAACT CCGAAATCGC CGCCAAAGGC GTGCTGCCGA CCTGCCAGGA TACCGGCACC GCGATCATCG TCGGTAAAAA AGGCCAGCGC GTGTGGACCG GTGGCGGTGA TGAAGAAGCG CTGTCGAAAG GCGTCTATAA CACCTATATC GAAGATAACC TGCGCTATTC ACAAAACGCG GCGCTGGACA TGTACAAAGA GGTCAACACC GGCACTAACC TGCCTGCGCA AATCGACCTG TACGCGGTAG ATGGCGATGA GTACAAATTC CTTTGCGTTG CGAAAGGCGG CGGCTCTGCC AACAAAACCT ATCTCTACCA GGAAACCAAA GCCCTGCTGA CTCCCGGCAA ACTGAAAAAC TTCCTCGTTG AGAAAATGCG TACCCTCGGT ACTGCAGCCT GCCCGCCGTA CCATATCGCG TTTGTGATTG GCGGTACGTC TGCAGAAACC AACCTGAAAA CCGTCAAGTT AGCAAGCGCT CACTATTACG ATGAACTGCC GACGGAAGGG AACGAACATG GTCAGGCGTT CCGCGATGTC CAGCTGGAAC AGGAACTGCT GGAAGAGGCC CAGAAACTCG GTCTTGGCGC GCAGTTTGGC GGTAAATACT TCGCGCACGA CATTCGCGTT ATCCGTCTGC CACGTCACGG CGCATCCTGC CCGGTAGGCA TGGGCGTCTC CTGCTCCGCT GACCGTAACA TCAAAGCGAA AATCAACCGC GAAGGTATCT GGATCGAAAA ACTGGAACAC AATCCAGACC AGTACATTCC ACAAGAACTG CGTCAGGCCG GTGAAGGCGA AGCGGTGAAG GTCGACCTTA ACCGCCCGAT GAAAGAGATC CTCGCCCAGC TTTCGCAATA TCCGGTTTCC ACTCGTTTGT CGCTCACCGG CACCATTATT GTGGGTCGAG ATATTGCACA CGCCAAGCTG AAAGAGCTGA TTGACGCCGG TAAAGAACTT CCGCAGTACA TCAAAGATCA CCCGATCTAC TACGCGGGTC CGGCGAAAAC CCCTGCCGGT TATCCATCAG GTTCACTTGG CCCAACCACC GCAGGCCGTA TGGACTCCTA CGTGGATCTG CTGCAATCCC ACGGCGGCAG CATGATCATG CTGGCGAAAG GTAACCGCAG TCAGCAGGTT ACCGACGCGT GCCATAAACA CGGCGGCTTC TACCTCGGTA GTATCGGCGG TCCGGCGGCG GTACTGGCGC AGCAGAGCAT CAAGCATCTG GAATGCGTCG CTTATCCGGA GCTGGGTATG GAAGCTATCT GGAAAATCGA AGTAGAAGAT TTCCCGGCGT TTATCCTGGT CGATGACAAA GGTAACGACT TCTTCCAGCA GATCGTCAAC AAACAGTGCG CGAACTGCAC TAAGTAA
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Protein sequence | MSNKPFIYQA PFPMGKDNTE YYLLTSDYVS VADFDGETIL KVEPEALTLL AQQAFHDASF MLRPAHQKQV AAILHDPEAS ENDKYVALQF LRNSEIAAKG VLPTCQDTGT AIIVGKKGQR VWTGGGDEEA LSKGVYNTYI EDNLRYSQNA ALDMYKEVNT GTNLPAQIDL YAVDGDEYKF LCVAKGGGSA NKTYLYQETK ALLTPGKLKN FLVEKMRTLG TAACPPYHIA FVIGGTSAET NLKTVKLASA HYYDELPTEG NEHGQAFRDV QLEQELLEEA QKLGLGAQFG GKYFAHDIRV IRLPRHGASC PVGMGVSCSA DRNIKAKINR EGIWIEKLEH NPDQYIPQEL RQAGEGEAVK VDLNRPMKEI LAQLSQYPVS TRLSLTGTII VGRDIAHAKL KELIDAGKEL PQYIKDHPIY YAGPAKTPAG YPSGSLGPTT AGRMDSYVDL LQSHGGSMIM LAKGNRSQQV TDACHKHGGF YLGSIGGPAA VLAQQSIKHL ECVAYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIVN KQCANCTK
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