| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_03850 |
|---|
| Symbol | trmA |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 4070471 |
|---|
| End bp | 4071571 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | tRNA (uracil-5-)-methyltransferase |
|---|
| Protein accession | ACT45643 |
|---|
| Protein GI | 253979973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00010868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG AACACCTTCC AACAGAACAG TATGAAGCGC AGTTAGCCGA AAAAGTGGTA
CGTTTGCAAA GTATGATGGC ACCGTTTTCT GACCTGGTTC CGGAAGTGTT TCGCTCGCCG
GTCAGTCATT ACCGGATGCG CGCGGAGTTC CGCATCTGGC ACGATGGCGA TGACCTGTAT
CACATCATTT TCGATCAACA AACCAAAAGC CGCATCCGCG TGGATAGCTT CCCCGCCGCC
AGTGAACTTA TCAACCAGTT GATGACGGCG ATGATTGCGG GTGTGCGTAA TAATCCCGTT
CTGCGCCACA AGTTGTTCCA GATTGATTAC CTCACTACGC TGAGTAATCA GGCGGTGGTT
TCCCTGCTAT ACCATAAGAA GCTGGATGAT GAGTGGCGTC AGGAAGCGGA GGCCCTGCGC
GATGCACTGC GCGCGCAGAA TCTGAATGTG CATCTGATTG GTCGGGCAAC GAAAACCAAA
ATCGAGCTGG ATCAGGATTA CATCGATGAA CGTCTGCCGG TCGCAGGGAA AGAGATGATC
TACCGTCAGG TAGAAAACAG CTTTACCCAG CCGAACGCGG CGATGAATAT TCAGATGCTG
GAATGGGCGC TGGACGTAAC CAAAGGCTCA AAAGGCGATT TACTGGAGCT GTACTGCGGC
AACGGTAACT TTTCATTAGC GCTGGCGCGT AATTTTGATC GGGTATTAGC CACCGAAATC
GCTAAGCCGT CGGTTGCTGC TGCGCAATAC AACATCGCAG CTAACCATAT TGATAACGTA
CAAATTATTC GTATGGCGGC AGAAGAATTT ACTCAGGCGA TGAATGGTGT GCGCGAGTTT
AACCGCCTGC AAGGGATCGA CTTAAAGAGT TATCAGTGCG AAACCATTTT TGTCGACCCA
CCGCGCAGCG GTCTGGACAG TGAAACCGAG AAAATGGTGC AGGCGTATCC GCGTATTTTG
TACATCTCCT GTAACCCGGA AACGTTATGC AAGAATCTGG AAACATTAAG CCAGACGCAC
AAGGTCGAAC GTCTGGCTCT GTTTGATCAG TTCCCCTACA CGCACCATAT GGAGTGCGGC
GTATTACTGA CCGCGAAGTA A
|
|---|
| Protein sequence | MTPEHLPTEQ YEAQLAEKVV RLQSMMAPFS DLVPEVFRSP VSHYRMRAEF RIWHDGDDLY
HIIFDQQTKS RIRVDSFPAA SELINQLMTA MIAGVRNNPV LRHKLFQIDY LTTLSNQAVV
SLLYHKKLDD EWRQEAEALR DALRAQNLNV HLIGRATKTK IELDQDYIDE RLPVAGKEMI
YRQVENSFTQ PNAAMNIQML EWALDVTKGS KGDLLELYCG NGNFSLALAR NFDRVLATEI
AKPSVAAAQY NIAANHIDNV QIIRMAAEEF TQAMNGVREF NRLQGIDLKS YQCETIFVDP
PRSGLDSETE KMVQAYPRIL YISCNPETLC KNLETLSQTH KVERLALFDQ FPYTHHMECG
VLLTAK
|
|---|
| |