Gene ECD_03848 details

Gene Information

• Locus tag: ECD_03848
• Symbol: yijC
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 4069368
• End bp: 4070072
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 53%
• Product: DNA-binding transcriptional repressor
• Protein accession: ACT45641
• Protein GI: 253979971

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0143191
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCATTC TCTGGTATAG TGCCAGCAGT ACTTTTGGCA AGGATTCAGA CATCGTGATG 
GGCGTAAGAG CGCAACAAAA AGAAAAAACC CGCCGTTCGC TGGTGGAAGC CGCATTTAGC 
CAATTAAGTG CTGAACGCAG CTTCGCCAGC CTGAGTTTGC GTGAAGTGGC GCGTGAAGCG 
GGCATTGCTC CCACCTCTTT TTATCGGCAT TTCCGCGACG TAGACGAACT GGGTCTGACC 
ATGGTTGATG AGAGCGGTTT AATGCTACGC CAACTCATGC GCCAGGCGCG TCAGCGTATC 
GCCAAAGGCG GGAGTGTGAT CCGCACCTCG GTCTCCACAT TTATGGAGTT CATCGGTAAT 
AATCCTAACG CCTTCCGGTT ATTATTGCGG GAACGCTCCG GCACCTCCGC TGCGTTTCGT 
GCCGCCGTTG CGCGTGAAAT TCAGCACTTC ATTGCGGAAC TTGCGGACTA TCTGGAACTC 
GAAAACCATA TGCCGCGTGC GTTTACTGAA GCGCAAGCCG AAGCAATGGT GACAATTGTC 
TTCAGTGCGG GTGCCGAGGC GTTGGACGTC GGCGTCGAAC AACGTCGGCA ATTAGAAGAG 
CGACTGGTAC TGCAACTGCG AATGATTTCG AAAGGGGCTT ATTACTGGTA TCGCCGTGAA 
CAAGAGAAAA CCGCAATTAT TCCGGGAAAT GTGAAGGACG AGTAA 

 

Protein sequence

MFILWYSASS TFGKDSDIVM GVRAQQKEKT RRSLVEAAFS QLSAERSFAS LSLREVAREA 
GIAPTSFYRH FRDVDELGLT MVDESGLMLR QLMRQARQRI AKGGSVIRTS VSTFMEFIGN 
NPNAFRLLLR ERSGTSAAFR AAVAREIQHF IAELADYLEL ENHMPRAFTE AQAEAMVTIV 
FSAGAEALDV GVEQRRQLEE RLVLQLRMIS KGAYYWYRRE QEKTAIIPGN VKDE