Gene ECD_03603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03603 
SymbolyieL 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp3788212 
End bp3789408 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content49% 
IMG OID 
Productpredicted xylanase 
Protein accessionACT45398 
Protein GI253979728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTA ATGAAAGGAA TATTACGATG AATATAAAAA TTGCTGCTTT AACGCTGGCT 
ATTGCCAGCG GTATTTCTGC TCAGTGGGCC ATAGCAGCGG ATATGCCAGC CAGCCCGGCA
CCCACTATCC CGGTGAAACA GTATGTGACT CAGGTCAATG CCGATAACAG CGTGACCTTT
CGCTACTTTG CCCCTGGGGC AAAAAATGTC TCTGTAGTGG TGGGTGTTCC GGTTCCGGAC
AATATTCACC CGATGACCAA AGACGAAGCA GGAGTCTGGT CGTGGCGCAC ACCTATCCTG
AAAGGCAACC TGTACGAGTA TTTTTTCAAT GTTGATGGTG TACGCAGCAT TGATACAGGC
ACCGCAATGA CTAAGCCTCA GCGCCAGGTT AACTCCAGTA TGATTCTGGT GCCAGGCAGT
TATCTGGATA CGCGTTCTGT TGCGCATGGT GATTTGATCG CCATAACTTA CCACTCCAAC
GCATTGCAAT TTGAACGTCA GATGTATGTC TGGACCCCGC CAGGATACAC CGGCATGGGC
GAGCCTTTGC CAGTGCTCTA TTTCTATCAC GGTTTTGGTG ATACCGGACG TTCCGCTATC
GATCAGGGGC GTATCCCGCA AATCATGGAT AACCTGCTGG CTGAAGGGAA AATTAAACCG
ATGCTGGTGG TGATCCCAGA TACCGAAACC GATGCGAAGG GCATTATTCC CGAAGATTTC
GTGCCTCAGG AAAGACGTAA AGTCTTTTAT CCGCTGAATG CTAAAGCGGC AGATCGCGAA
CTGATGAACG ATATTATCCC GCTGATTAGC AAGCGTTTTA ACGTCCGTAA AGATGCCGAT
GGTCGCGCAC TGGCAGGGCT TTCACAAGGT GGGTATCAGG CGCTGGTATC GGGAATGAAT
CATCTGGAAA GCTTTGGCTG GCTGGCCACA TTCAGTGGTG TTACCACGAC AACCGTACCG
GATGAAGGTG TCGCGGCCCG GCTGAACGAT CCGGCAGCTA TTAACCAGCA ACTACGTAAT
TTTACTGTGG TCGTTGGTGA TAAAGATGTC GTAACCGGCA AGGATATCGC CGGGCTGAAA
ACTGAGCTTG AGCAGAAAAA AATTAAGTTT GATTACCAGG AATATCCCGG CCTGAACCAT
GAAATGGATG TCTGGCGGCC TGCCTATGCA GCCTTCGTAC AGAAATTATT TAAATAA
 
Protein sequence
MELNERNITM NIKIAALTLA IASGISAQWA IAADMPASPA PTIPVKQYVT QVNADNSVTF 
RYFAPGAKNV SVVVGVPVPD NIHPMTKDEA GVWSWRTPIL KGNLYEYFFN VDGVRSIDTG
TAMTKPQRQV NSSMILVPGS YLDTRSVAHG DLIAITYHSN ALQFERQMYV WTPPGYTGMG
EPLPVLYFYH GFGDTGRSAI DQGRIPQIMD NLLAEGKIKP MLVVIPDTET DAKGIIPEDF
VPQERRKVFY PLNAKAADRE LMNDIIPLIS KRFNVRKDAD GRALAGLSQG GYQALVSGMN
HLESFGWLAT FSGVTTTTVP DEGVAARLND PAAINQQLRN FTVVVGDKDV VTGKDIAGLK
TELEQKKIKF DYQEYPGLNH EMDVWRPAYA AFVQKLFK