| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_03370 |
|---|
| Symbol | yhjD |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 3534550 |
|---|
| End bp | 3535563 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | conserved inner membrane protein |
|---|
| Protein accession | ACT45171 |
|---|
| Protein GI | 253979501 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0762767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGG AAAACGAGAT CAAACGTCCC ATCCAGGATC TGGAGCACGA GCCGATTAAG
CCGTTGGATA ATAGCGAGAA AGGCAGCAAA GTTAGCCAGG CGCTGGAAAC CGTCACCACC
ACTGCCGAAA AAGTCCAACG CCAACCGGTT ATTGCGCACC TGATTCGCGC GACAGAACGC
TTTAACGATC GGCTGGGTAA CCAGTTTGGT GCGGCTATCA CCTATTTCTC ATTTTTGTCG
ATGATACCAA TTTTGATGGT GTCGTTTGCC GCAGGGGGCT TTGTGCTGGC CTCCCATCCG
ATGTTGCTAC AGGATATCTT CGACAAAATT CTGCAAAACA TCAGCGATCC GACGCTAGCC
GCCACGTTGA AAAACACCAT CAACACCGCC GTTCAGCAGC GTACGACTGT AGGGCTTGTC
GGCCTGGCGG TGGCACTTTA TTCCGGCATC AACTGGATGG GTAACCTGCG TGAAGCGATT
CGTGCCCAGT CGCGCGATGT CTGGGAACGC TCGCCGCAAG ATCAGGAGAA GTTCTGGGTA
AAATATCTGC GAGATTTTAT TTCGCTGATT GGTTTGTTGA TTGCGCTGAT TGTGACGCTT
TCGATCACCT CGGTTGCCGG TTCGGCGCAG CAAATGATTA TTAGCGCCCT GCACCTGAAC
AGCATTGAGT GGCTGAAACC GACGTGGCGA TTGATTGGCC TGGCGATTTC CATCTTCGCC
AACTATCTGC TTTTCTTCTG GATCTTCTGG CGGTTGCCGC GCCACCGTCC GCGCAAAAAA
GCCCTGATTC GCGGAACATT TCTGGCTGCT ATTGGTTTTG AAGTGATTAA AATCGTGATG
ACCTACACCC TGCCATCGTT GATGAAATCC CCCTCTGGCG CAGCATTTGG TTCCGTGCTG
GGGCTGATGG CATTTTTCTA CTTCTTCGCC CGTTTGACGC TGTTTTGCGC GGCGTGGATT
GCCACCGCCG AATATAAAGA CGACCCGCGA ATGCCGGGGA AAACGCAGCC TTAA
|
|---|
| Protein sequence | MTQENEIKRP IQDLEHEPIK PLDNSEKGSK VSQALETVTT TAEKVQRQPV IAHLIRATER
FNDRLGNQFG AAITYFSFLS MIPILMVSFA AGGFVLASHP MLLQDIFDKI LQNISDPTLA
ATLKNTINTA VQQRTTVGLV GLAVALYSGI NWMGNLREAI RAQSRDVWER SPQDQEKFWV
KYLRDFISLI GLLIALIVTL SITSVAGSAQ QMIISALHLN SIEWLKPTWR LIGLAISIFA
NYLLFFWIFW RLPRHRPRKK ALIRGTFLAA IGFEVIKIVM TYTLPSLMKS PSGAAFGSVL
GLMAFFYFFA RLTLFCAAWI ATAEYKDDPR MPGKTQP
|
|---|
| |