Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03176 |
Symbol | gspD |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 3317547 |
End bp | 3318563 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | general secretory pathway component, cryptic |
Protein accession | ACT44980 |
Protein GI | 253979310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0985911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAC TCAATAAAAT CACCTGCTGC TTGCTGGCAG CACTACTCAT GCCTTGTGCA GGACACGCTG AGAACGAACA ATACGGCGCG AACTTCAATA ACGCCGATAT CCGCCAGTTC GTGGAAATAG TGGGTCAGCA TCTTGGCAAA ACGATCCTGA TCGACCCTTC GGTACAGGGA ACCATTTCCG TACGCAGTAA TGATACGTTT AGCCAACAGG AGTACTACCA GTTCTTTTTA AGTATTCTTG ATCTTTACGG TTATTCCGTG ATCACGCTGG ACAATGGTTT TCTGAAAGTG GTTCGCTCAG CTAATGTAAA AACATCGCCA GGGATGATTG CTGACAGTTC TCGTCCAGGC GTAGGTGATG AGTTGGTCAC CCGAATCGTA CCGCTTGAGA ACGTTCCTGC TCGTGACCTG GCCCCCCTGC TCCGCCAGAT GATGGATGCG GGTAGCGTCG GTAATGTTGT GCATTATGAA CCCTCCAACG TTCTTATTCT GACCGGTCGT GCCTCCACCA TTAATAAACT GATTGAAGTC ATAAAGCGCG TTGATGTCAT CGGCACAGAG AAGCAGCAAA TTATTCATCT GGAAGTCTCC AGCGTTGACT CTTCCTCTAA CTCGACGCTC GGCCCGACGT TTAATACCCG TACTATTCAA AACGCCGTGC TGGTCAAAAC CGGTGAAACG GTGGTCCTGG GCGGATTGCT GGATGATTTT TCTAAAGAGC AAGTGTCAAA GGTTCCTCTG CTTGGCGATA TTCCTTTAGT GGGGCAACTC TTCCGCTATA CCTCCACCGA GCGCGCTAAA CGCAACCTGA TGGTATTTAT CCGTCCGACG ATTATCCGTG ACGATGATGT TTATCGCTCA CTGTCAAAAG AGAAATACAC CCGTTACCGT CAGGAGCAAC AACAGCGGAT CGACGGGAAA TCAAAAGCGC TGGTTGGCTC GGAAGATTTG CCGGTGCTGG ATGAAAACAC GTTCAACAGT CACGCCCCTG CGCCATCGTC ACGGTGA
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Protein sequence | MKGLNKITCC LLAALLMPCA GHAENEQYGA NFNNADIRQF VEIVGQHLGK TILIDPSVQG TISVRSNDTF SQQEYYQFFL SILDLYGYSV ITLDNGFLKV VRSANVKTSP GMIADSSRPG VGDELVTRIV PLENVPARDL APLLRQMMDA GSVGNVVHYE PSNVLILTGR ASTINKLIEV IKRVDVIGTE KQQIIHLEVS SVDSSSNSTL GPTFNTRTIQ NAVLVKTGET VVLGGLLDDF SKEQVSKVPL LGDIPLVGQL FRYTSTERAK RNLMVFIRPT IIRDDDVYRS LSKEKYTRYR QEQQQRIDGK SKALVGSEDL PVLDENTFNS HAPAPSSR
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