| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_02018 |
|---|
| Symbol | gatC |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 2070726 |
|---|
| End bp | 2072081 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | galactitol-specific enzyme IIC component of PTS |
|---|
| Protein accession | ACT43844 |
|---|
| Protein GI | 253978174 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCAG AAGTCATGCG TTATATTCTC GACCTCGGCC CTACGGTGAT GCTGCCGATT
GTCATCATTA TTTTTTCTAA AATATTAGGC ATGAAGGCAG GCGATTGCTT TAAAGCGGGT
CTGCATATCG GGATTGGCTT TGTTGGCATT GGCCTTGTGA TTGGCTTAAT GCTGGATTCC
ATTGGCCCGG CGGCGAAAGC GATGGCGGAA AATTTCGACC TGAATCTGCA TGTGGTCGAT
GTTGGCTGGC CGGGCTCTTC ACCAATGACC TGGGCGTCGC AAATTGCGCT GGTGGCGATT
CCGATTGCGA TTCTGGTTAA CGTGGCGATG TTACTGACCC GTATGACGCG GGTGGTAAAT
GTTGATATCT GGAATATCTG GCATATGACC TTCACCGGCG CGTTGCTGCA TCTGGCAACC
GGTTCATGGA TGATAGGGAT GGCAGGTGTG GTAATTCACG CGGCGTTTGT TTATAAGCTC
GGCGACTGGT TTGCCCGCGA TACCCGAAAT TTCTTTGAGC TGGAAGGTAT TGCTATTCCG
CACGGTACGT CGGCGTATAT GGGGCCGATT GCGGTGCTGG TCGATGCTAT CATCGAGAAA
ATCCCAGGCG TTAACCGAAT TAAATTTAGC GCCGACGATA TTCAGCGCAA ATTTGGTCCA
TTTGGCGAGC CTGTCACCGT GGGTTTTGTG ATGGGGCTGA TTATCGGCAT CCTCGCGGGT
TACGATGTCA AAGGTGTATT GCAGCTGGCG GTAAAAACGG CGGCAGTGAT GCTGCTAATG
CCACGGGTGA TTAAACCCAT CATGGATGGT TTAACGCCCA TCGCTAAGCA GGCTCGTAGT
CGTTTACAGG CGAAGTTCGG CGGTCAGGAG TTCCTGATTG GCCTTGATCC GGCGTTGCTG
CTGGGACATA CGGCGGTGGT ATCGGCAAGC CTGATTTTTA TCCCACTCAC CATTTTAATT
GCTGTTTGTG TGCCGGGTAA TCAGGTGCTG CCGTTTGGCG ATCTTGCCAC CATCGGCTTC
TTCGTGGCGA TGGCGGTCGC CGTGCATCGT GGAAATCTGT TCCGCACCTT AATCTCGGGT
GTCATCATTA TGAGCATCAC CCTGTGGATC GCGACGCAAA CTATTGGTTT GCACACCCAA
CTGGCGGCTA ATGCTGGGGC GTTAAAAGCC GGGGGTATGG TGGCTTCAAT GGATCAGGGC
GGTTCTCCCA TTACCTGGTT ACTGATTCAG GTTTTCTCCC CGCAAAATAT TCCCGGTTTC
ATTATTATCG GTGCAATTTA TCTGACCGGT ATTTTCATGA CCTGGCGTAG AGCGCGTGGC
TTTATTAAAC AAGAGAAAGT CGTTCTCGCA GAATAA
|
|---|
| Protein sequence | MFSEVMRYIL DLGPTVMLPI VIIIFSKILG MKAGDCFKAG LHIGIGFVGI GLVIGLMLDS
IGPAAKAMAE NFDLNLHVVD VGWPGSSPMT WASQIALVAI PIAILVNVAM LLTRMTRVVN
VDIWNIWHMT FTGALLHLAT GSWMIGMAGV VIHAAFVYKL GDWFARDTRN FFELEGIAIP
HGTSAYMGPI AVLVDAIIEK IPGVNRIKFS ADDIQRKFGP FGEPVTVGFV MGLIIGILAG
YDVKGVLQLA VKTAAVMLLM PRVIKPIMDG LTPIAKQARS RLQAKFGGQE FLIGLDPALL
LGHTAVVSAS LIFIPLTILI AVCVPGNQVL PFGDLATIGF FVAMAVAVHR GNLFRTLISG
VIIMSITLWI ATQTIGLHTQ LAANAGALKA GGMVASMDQG GSPITWLLIQ VFSPQNIPGF
IIIGAIYLTG IFMTWRRARG FIKQEKVVLA E
|
|---|
| |