Gene ECD_01929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01929 
SymbolwzzB 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1993124 
End bp1994107 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content46% 
IMG OID 
Productregulator of length of O-antigen component of lipopolysaccharide chains 
Protein accessionACT43780 
Protein GI253978110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAG TAGAAAATAA TAATGTTTCT GGGCAAAACC ATGACCCGGA ACAGATTGAT 
TTGATTGATT TACTAGTGCA GTTGTGGCGT GGCAAGATGA CAATCATCAT TTCCGTCATT
GTGGCTATTG CCCTGGCTAT TGGATATTTG GCAGTAGCGA AGGAGAAATG GACGTCAACA
GCAATTATCA CTCAGCCCGA TGTGGGGCAA ATTGCTGGCT ATAACAATGC CATGAATGTT
ATCTATGGTC AGGCTGCACC GAAAGTATCG GATTTGCAGG AGACGTTAAT TGGTCGCTTC
AGTTCTGCCT TCTCTGCATT AGCAGAAACG CTGGATAATC AGGAAGAACC AGAAAAACTT
ACCATCGAAC CTTCTGTTAA GAACCAGCAA TTACCATTGA CTGTTTCTTA TGTTGGGCAA
ACTGCAGAGG GCGCACAAAT GAAGTTGGCC CAATACATTC AGCAAGTTGA CGATAAAGTG
AATCAAGAGT TAGAAAAGGA TCTCAAGGAC AACATTGCTC TGGGACGGAA AAACTTGCAG
GACTCTTTAA GAACGCAGGA AGTGGTTGCG CAGGAGCAGA AAGATCTGCG TATCCGTCAG
ATTCAGGAAG CGTTGCAGTA TGCGAATCAG GCGCAGGTGA CAAAACCGCA GATTCAACAG
ACTGGCGAAG ATATCACACA AGATACGTTG TTCCTTTTGG GGAGCGAAGC GCTGGAGTCG
ATGATTAAGC ATGAGGCGAC CCGTCCGTTG GTGTTCTCAC CAGACTACTA TCAGACTCGT
CAAAACCTGC TTGATATCGA AAGCTTAAAG GTTGATGATC TTGATATTCA TGCTTACCGC
TATGTAATGA AACCGACGTT ACCTATTCGT CGTGATAGCC CGAAAAAGGC AATTACCTTG
ATTCTGGCGG TGCTGCTGGG TGGCATGGTT GGCGCGGGGA TTGTGCTGGG GCGTAATGCT
CTACGCAATT ACAACGCGAA GTAA
 
Protein sequence
MMRVENNNVS GQNHDPEQID LIDLLVQLWR GKMTIIISVI VAIALAIGYL AVAKEKWTST 
AIITQPDVGQ IAGYNNAMNV IYGQAAPKVS DLQETLIGRF SSAFSALAET LDNQEEPEKL
TIEPSVKNQQ LPLTVSYVGQ TAEGAQMKLA QYIQQVDDKV NQELEKDLKD NIALGRKNLQ
DSLRTQEVVA QEQKDLRIRQ IQEALQYANQ AQVTKPQIQQ TGEDITQDTL FLLGSEALES
MIKHEATRPL VFSPDYYQTR QNLLDIESLK VDDLDIHAYR YVMKPTLPIR RDSPKKAITL
ILAVLLGGMV GAGIVLGRNA LRNYNAK