| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01445 |
|---|
| Symbol | yddS |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 1516399 |
|---|
| End bp | 1517949 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | D-ala-D-a la transporter subunit |
|---|
| Protein accession | ACT43327 |
|---|
| Protein GI | 253977657 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAT CAATATCGTT TCGTCCCACA TTGCTCGCGC TCGTCCTTGC CACAAATTTC
CCGGTTGCGC ACGCCGCCGT ACCAAAAGAT ATGCTGGTGA TTGGTAAGGC CGCCGATCCA
CAAACCCTCG ACCCGGCGGT AACAATAGAT AATAACGACT GGACAGTGAC CTACCCGTCT
TATCAGCGGC TGGTTCAGTA CAAAACGGAC GGTGATAAAG GCTCAACCGA CGTTGAAGGC
GATCTGGCAA GTAGCTGGAA AGCGTCTGAC GATCAAAAAG AGTGGACGTT CACCCTGAAA
GATAATGCTA AATTTGCCGA TGGCACACCT GTCACTGCCG AAGCAGTAAA ACTTTCTTTT
GAGCGGCTAC TAAAAATCGG CCAGGGGCCA GCAGAAGCAT TTCCCAAAGA TTTAAAGATT
GATGCTCCCG ACGAACATAC GGTGAAGTTT ACCCTTAGCC AGCCATTCGC ACCGTTCCTC
TACACGCTGG CGAATGACGG TGCATCCATT ATCAATCCGG CGGTGTTAAA GGAACATGCA
GCGGATGATG CCCGCGGCTT CCTCGCGCAA AATACCGCCG GTTCCGGACC ATTTATGCTG
AAAAGCTGGC AAAAAGGTCA GCAATTAGTT CTGGTGCCAA ATCCGCATTA CCCTGGCAAT
AAACCGAACT TTAAGCGAGT ATCGGTAAAA ATTATTGGTG AAAGTGCCTC CCGTCGCCTG
CAGCTCTCCC GTGGTGATAT TGACATTGCC GATGCGCTGC CGGTGGATCA ACTCAACGCC
CTGAAGCAGG AAAACAAAGT CAATGTGGCA GAGTATCCGT CACTGCGCGT CACCTACCTG
TATCTGAATA ACAGCAAAGC GCCACTTAAT CAGGCGGATC TGCGTCGGGC CATTTCCTGG
TCTACCGATT ACCAGGGAAT GGTTAACGGC ATTCTGAGTG GTAACGGAAA ACAGATGCGC
GGCCCGATTC CGGAAGGCAT GTGGGGCTAC GATGCGACGG CAATGCAATA CAACCATGAC
GAAACGAAAG CCAAAGCTGA ATGGGATAAA GTGACGAACA AACCCACCAG CCTGACGTTT
CTCTACTCCG ATAACGATCC GAACTGGGAG CCTATTGCTC TGGCGACACA ATCCAGTCTC
AACAAGCTGG GCATCATTGT GAAGCTGGAA AAGCTGGCGA ACGCCACCAT GCGCGACAGA
GTGGGTAAAG GTGATTACGA CATTGCGATT GGCAACTGGA GTCCGGATTT TGCCGACCCG
TATATGTTTA TGAATTACTG GTTTGAGTCA GACAAAAAAG GTCTGCCGGG TAACCGCTCG
TTCTATGAAA ACAGTGAGGT CGATAAGTTA CTGCGCAATG CGCTTGCGAC CACCGACCAG
ACGCAGCGTA CCCGGGACTA CCAGCAGGCA CAGAAAATCG TCATTGATGA CGCTGCTTAT
GTGTACCTGT TCCAGAAAAA CTACCAACTG GCGATGAACA AAGAGGTGAA AGGCTTTGTG
TTCAATCCCA TGCTGGAACA GGTCTTCAAT ATCAATACCA TGAGTAAATA A
|
|---|
| Protein sequence | MKRSISFRPT LLALVLATNF PVAHAAVPKD MLVIGKAADP QTLDPAVTID NNDWTVTYPS
YQRLVQYKTD GDKGSTDVEG DLASSWKASD DQKEWTFTLK DNAKFADGTP VTAEAVKLSF
ERLLKIGQGP AEAFPKDLKI DAPDEHTVKF TLSQPFAPFL YTLANDGASI INPAVLKEHA
ADDARGFLAQ NTAGSGPFML KSWQKGQQLV LVPNPHYPGN KPNFKRVSVK IIGESASRRL
QLSRGDIDIA DALPVDQLNA LKQENKVNVA EYPSLRVTYL YLNNSKAPLN QADLRRAISW
STDYQGMVNG ILSGNGKQMR GPIPEGMWGY DATAMQYNHD ETKAKAEWDK VTNKPTSLTF
LYSDNDPNWE PIALATQSSL NKLGIIVKLE KLANATMRDR VGKGDYDIAI GNWSPDFADP
YMFMNYWFES DKKGLPGNRS FYENSEVDKL LRNALATTDQ TQRTRDYQQA QKIVIDDAAY
VYLFQKNYQL AMNKEVKGFV FNPMLEQVFN INTMSK
|
|---|
| |