Gene ECD_01289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01289 
SymbolycjP 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1360456 
End bp1361298 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content53% 
IMG OID 
Productpredicted sugar transporter subunit: membrane component of ABC superfamily 
Protein accessionACT43177 
Protein GI253977507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.553016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA ATAAACGCAC ACTCAGTCGC ATCGGTTTTT ACTGCGGGCT GGCGCTGTTT 
CTCATCATCA CGCTGTTTCC ATTTTTTGTG ATGCTGATGA CCTCGTTCAA GGGCGCGAAA
GAGGCGATCT CACTGCATCC TACGCTGCTG CCGCAGCAGT GGACGCTGGA GCATTACGTC
GACATTTTTA ACCCGATGAT TTTCCCGTTT GTCGACTACT TCCGTAACAG TCTGGTGGTG
TCTGTGGTTT CATCCGTGGT GGCGGTATTC CTCGGCATTC TTGGGGCTTA CGCGCTTTCC
CGCCTGCGCT TTAAAGGTCG GATGACCATC AACGCCAGCT TTTACACGGT GTATATGTTC
TCTGGCATTT TGCTGGTGGT GCCGCTTTTC AAAATCATCA CCGCGCTTGG CATTTACGAC
ACTGAGATGG CGCTGATCAT CACCATGGTG ACGCAAACTC TGCCCACCGC CGTGTTTATG
CTGAAAAGCT ACTTCGACAC CATCCCCGAT GAGATCGAAG AAGCGGCGAT GATGGATGGC
CTCAACCGTC TGCAAATTAT CTTCCGCATC ACCGTGCCGT TGGCGATGTC CGGGCTGATA
TCCGTGTTCG TCTACTGCTT TATGGTGGCG TGGAACGACT ATCTGTTTGC GTCGATTTTC
CTCTCCAGCG CCAGCAATTT CACCTTACCG GTGGGCCTGA ACGCGCTGTT CAGTACGCCA
GATTACATCT GGGGACGGAT GATGGCGGCC TCACTGGTGA CCGCATTGCC GGTGGTGATT
ATGTATGCGC TTTCGGAACG TTTTATTAAG AGTGGTTTGA CCGCCGGTGG CGTGAAGGGC
TAA
 
Protein sequence
MATNKRTLSR IGFYCGLALF LIITLFPFFV MLMTSFKGAK EAISLHPTLL PQQWTLEHYV 
DIFNPMIFPF VDYFRNSLVV SVVSSVVAVF LGILGAYALS RLRFKGRMTI NASFYTVYMF
SGILLVVPLF KIITALGIYD TEMALIITMV TQTLPTAVFM LKSYFDTIPD EIEEAAMMDG
LNRLQIIFRI TVPLAMSGLI SVFVYCFMVA WNDYLFASIF LSSASNFTLP VGLNALFSTP
DYIWGRMMAA SLVTALPVVI MYALSERFIK SGLTAGGVKG