Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01287 |
Symbol | ycjN |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 1358275 |
End bp | 1359567 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily |
Protein accession | ACT43175 |
Protein GI | 253977505 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAT CAAAAATCGT GCTGTTATCA GCACTGGTTT CATGCGCCCT GATTTCAGGC TGTAAAGAAG AAAATAAAAC GAATGTATCC ATCGAATTTA TGCATTCTTC GGTGGAGCAG GAGCGCCAGG CCGTTATCAG TAAATTGATT GCCCGTTTTG AAAAAGAAAA CCCTGGCATC ACCGTTAAGC AAGTGCCCGT GGAAGAAGAT GCCTATAACA CTAAAGTCAT TACTCTTTCA CGTAGCGGTT CGCTGCCGGA AGTGATCGAA ACCAGCCATG ACTACGCCAA AGTGATGGAC AAAGAGCAGC TTATCGATCG CAAAGCGGTT GCCACAGTCA TCAGCAACGT TGGTGAAGGC GCGTTTTACG ATGGCGTACT GCGTATTGTG CGTACCGAAG ATGGTAGCGC ATGGACCGGT GTTCCTGTCA GCGCCTGGAT TGGCGGTATC TGGTATCGCA AAGATGTGCT GGCAAAAGCG GGGCTTGAGG AGCCGAAAAA CTGGCAACAG CTGCTGGACG TTGCACAGAA ACTGAATGAC CCGGCGAATA AAAAATACGG CATTGCGCTG CCTACAGCAG AAAGCGTGTT GACGGAACAA TCCTTCTCCC AGTTTGCGTT ATCCAACCAG GCTAACGTCT TTAACGCCGA AGGCAAAATC ACCCTTGATA CACCAGAGAT GATGCAGGCA CTGACCTATT ACCGCGACCT TGCTGCCAAC ACTATGCCGG GTTCTAACGA CATCATGGAA GTGAAAGACG CCTTTATGAA CGGCACCGCG CCGATGGCGA TTTACTCCAC CTATATCCTT CCGGCTGTGA TTAAAGAAGG CGACCCGAAA AACGTCGGTT TCGTGGTGCC AACCGAGAAA AACTCTGCGG TCTACGGCAT GTTGACCTCG CTGACCATTA CCGCCGGGCA AAAGACCGAA GAGACGGAAG CAGCAGAAAA ATTTGTCACC TTTATGGAGC AGGCAGACAA CATTGCCGAC TGGGTGATGA TGTCGCCAGG TGCTGCGCTG CCGGTGAATA AAGCGGTGGT GACTACCGCC ACCTGGAAAG ACAACGACGT TATTAAGGCG CTGGGTGAAC TACCGAATCA GCTAATCGGT GAACTGCCAA ATATTCAGGT TTTTGGCGCA GTAGGGGATA AAAACTTTAC CCGCATGGGT GATGTGACGG GTTCTGGCGT GGTGAGTTCA ATGGTGCATA ACGTCACCGT GGGTAAAGCC GATCTCTCTA CTACGCTGCA AGCGAGCCAG AAAAAACTGG ATGAACTGAT CGAACAGCAC TAA
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Protein sequence | MIKSKIVLLS ALVSCALISG CKEENKTNVS IEFMHSSVEQ ERQAVISKLI ARFEKENPGI TVKQVPVEED AYNTKVITLS RSGSLPEVIE TSHDYAKVMD KEQLIDRKAV ATVISNVGEG AFYDGVLRIV RTEDGSAWTG VPVSAWIGGI WYRKDVLAKA GLEEPKNWQQ LLDVAQKLND PANKKYGIAL PTAESVLTEQ SFSQFALSNQ ANVFNAEGKI TLDTPEMMQA LTYYRDLAAN TMPGSNDIME VKDAFMNGTA PMAIYSTYIL PAVIKEGDPK NVGFVVPTEK NSAVYGMLTS LTITAGQKTE ETEAAEKFVT FMEQADNIAD WVMMSPGAAL PVNKAVVTTA TWKDNDVIKA LGELPNQLIG ELPNIQVFGA VGDKNFTRMG DVTGSGVVSS MVHNVTVGKA DLSTTLQASQ KKLDELIEQH
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