| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01263 |
|---|
| Symbol | rnb |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 1333345 |
|---|
| End bp | 1335279 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | exoribonuclease II |
|---|
| Protein accession | ACT43151 |
|---|
| Protein GI | 253977481 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAGG ACAACCCGCT GCTAGCGCAG CTTAAACAGC AACTGCATTC CCAGACGCCA
CGCGCTGAAG GGGTGGTAAA AGCCACAGAA AAAGGCTTTG GCTTCCTGGA AGTCGACGCG
CAAAAAAGTT ATTTCATTCC GCCGCCGCAG ATGAAAAAAG TCATGCATGG CGACCGAATT
ATCGCGGTGA TCCACAGTGA AAAAGAACGT GAATCCGCAG AGCCAGAAGA ACTGGTTGAA
CCGTTCCTGA CTCGTTTCGT GGGTAAGGTT CAGGGCAAAA ATGACCGTCT GGCCATCGTT
CCTGATCATC CACTCTTAAA AGACGCCATT CCTTGCCGCG CAGCCCGTGG CCTGAACCAC
GAGTTTAAAG AAGGCGACTG GGCGGTTGCC GAAATGCGCC GTCATCCGCT GAAAGGCGAT
CGTTCTTTCT ATGCAGAACT GACACAATAC ATCACTTTTG GTGACGATCA CTTTGTACCG
TGGTGGGTTA CCCTTGCACA CCATAATCTG GAAAAAGAAG CACCAGACGG CGTCGCTACC
GAAATGCTCG ATGAAGGTCT GGTTCGTGAA GATCTGACCG CGCTGGATTT TGTCACCATC
GACAGTGCCA GCACAGAAGA TATGGATGAC GCCCTTTTCG CTAAGGCGTT GCCGGATGAC
AAACTTCAGC TGATTGTGGC GATTGCCGAT CCAACCGCGT GGATTGCTGA AGGCAGTAAG
CTGGACAAAG CCGCGAAAAT TCGCGCATTC ACCAACTATC TGCCTGGCTT CAACATCCCT
ATGCTGCCTC GCGAGCTTTC TGACGATCTC TGCTCACTGC GCGCCAATGA AGTCCGCCCG
GTACTGGCAT GCCGCATGAC GCTCTCCGCT GATGGCACCA TTGAAGATAA TATCGAATTC
TTTGCCGCCA CCATCGAATC CAAAGCGAAG CTGGTGTATG ACCAGGTTTC TGACTGGCTG
GAAAATACCG GTGACTGGAA GCCTGAAAGT GAAGCAATTG CCGAACAAGT CCGTTTGTTA
GCGCAAATTT GCCAACGCCG CGGCGAGTGG CGTCATAACC ACGCACTGGT GTTTAAAGAT
CGCCCGGATT ACCGCTTTAT TCTCGGTGAA AAAGGTGAAG TGCTGGATAT CGTCGCCGAG
CCTCGTCGCA TTGCCAACCG TATCGTCGAA GATGCGATGA TTGCCGCTAA CATTTGTGCG
GCCCGCGTAC TGCGCGATAA GCTCGGTTTT GGCATCTATA ACGTGCATAT GGGCTTTGAT
CCGGCGAATG CCGACGCGCT GGCAGCGTTG CTGAAAACGC ACGGTCTGCA TGTCGATGCC
GAAGAAGTGC TCACGCTGGA CGGTTTCTGC AAACTGCGTC GTGAACTGGA TGCGCAACCA
ACTGGTTTCC TCGACAGCCG CATTCGTCGC TTCCAGTCAT TTGCTGAAAT TAGCACTGAA
CCCGGTCCTC ACTTTGGCCT CGGTCTGGAA GCATACGCCA CCTGGACATC GCCGATCCGT
AAATATGGCG ACATGATCAA CCACCGTCTG CTGAAAGCGG TTATCAAAGG CGAAACTGCG
ACGCGTCCAC AGGATGAGAT CACTGTCCAA ATGGCCGAGC GTCGCCGTCT CAATCGGATG
GCAGAACGTG ATGTTGGTGA CTGGTTATAC GCACGCTTCC TGAAAGACAA AGCCGGGACC
GACACCCGTT TCGCGGCGGA AATTGTCGAT ATCAGCCGTG GCGGCATGCG TGTTCGTTTG
GTTGATAACG GCGCTATCGC CTTTATTCCT GCACCTTTCT TACACGCTGT GCGCGATGAA
ATGGTTTGCA GCCAGGAAAA CGGCACCGTA CAAATTAAAG GTGAAACGGT TTATAAAGTA
ACTGACGTTA TTGACGTCAC CATTGCCGAA GTCCGCATGG AAACCCGCAG CATTATTGCG
CGCCCGGTCG CGTAA
|
|---|
| Protein sequence | MFQDNPLLAQ LKQQLHSQTP RAEGVVKATE KGFGFLEVDA QKSYFIPPPQ MKKVMHGDRI
IAVIHSEKER ESAEPEELVE PFLTRFVGKV QGKNDRLAIV PDHPLLKDAI PCRAARGLNH
EFKEGDWAVA EMRRHPLKGD RSFYAELTQY ITFGDDHFVP WWVTLAHHNL EKEAPDGVAT
EMLDEGLVRE DLTALDFVTI DSASTEDMDD ALFAKALPDD KLQLIVAIAD PTAWIAEGSK
LDKAAKIRAF TNYLPGFNIP MLPRELSDDL CSLRANEVRP VLACRMTLSA DGTIEDNIEF
FAATIESKAK LVYDQVSDWL ENTGDWKPES EAIAEQVRLL AQICQRRGEW RHNHALVFKD
RPDYRFILGE KGEVLDIVAE PRRIANRIVE DAMIAANICA ARVLRDKLGF GIYNVHMGFD
PANADALAAL LKTHGLHVDA EEVLTLDGFC KLRRELDAQP TGFLDSRIRR FQSFAEISTE
PGPHFGLGLE AYATWTSPIR KYGDMINHRL LKAVIKGETA TRPQDEITVQ MAERRRLNRM
AERDVGDWLY ARFLKDKAGT DTRFAAEIVD ISRGGMRVRL VDNGAIAFIP APFLHAVRDE
MVCSQENGTV QIKGETVYKV TDVIDVTIAE VRMETRSIIA RPVA
|
|---|
| |