Gene ECD_00938 details

Gene Information

• Locus tag: ECD_00938
• Symbol: ssuC
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: -
• Start bp: 999130
• End bp: 999921
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 56%
• Product: alkanesulfonate transporter subunit
• Protein accession: ACT42833
• Protein GI: 253977163

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.028081
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACGC CAGTGAAGAA GTGGTTATTG CGCGTTGCCC CCTGGTTTTT ACCGGTGGGC 
ATCGTGGCGG TGTGGCAACT GGCCTCCTCG GTTGGCTGGC TGTCGACGCG TATTTTGCCT 
TCACCGGAAG GAGTGGTGAC GGCGTTCTGG ACGCTCTCCG CCAGCGGCGA ACTGTGGCAG 
CATCTGGCGA TCAGCTCCTG GCGGGCGCTG ATTGGCTTTT CAATTGGCGG ATCGCTGGGG 
TTGATTTTGG GACTGATTAG CGGGCTATCT CGCTGGGGAG AACGGCTGCT GGATACCTCA 
ATTCAGATGT TGCGCAACGT GCCGCATCTG GCGCTGATCC CGCTGGTGAT TTTGTGGTTT 
GGCATTGATG AATCCGCAAA AATCTTTCTG GTGGCGCTCG GTACGCTATT CCCCATTTAT 
ATCAACACCT GGCATGGCAT CCGTAATATC GATCGCGGGT TGGTGGAGAT GGCGCGTAGC 
TATGGATTAT CCGGCATACC GCTGTTTATC CATGTGATCC TGCCTGGTGC CCTGCCCTCA 
ATTATGGTCG GCGTGCGTTT TGCGTTGGGC CTGATGTGGC TGACGCTGAT TGTTGCCGAA 
ACCATTTCTG CCAATTCAGG CATTGGTTAT CTGGCGATGA ATGCGCGGGA GTTTTTGCAA 
ACGGACGTGG TGGTAGTCGC TATTATTCTT TACGCCCTGC TCGGCAAACT GGCTGACGTC 
AGCGCGCAGC TGTTAGAGCG CCTCTGGTTG CGCTGGAACC CGGCTTATCA TTTGAAGGAG 
GCCACGGTAT GA 

 

Protein sequence

MATPVKKWLL RVAPWFLPVG IVAVWQLASS VGWLSTRILP SPEGVVTAFW TLSASGELWQ 
HLAISSWRAL IGFSIGGSLG LILGLISGLS RWGERLLDTS IQMLRNVPHL ALIPLVILWF 
GIDESAKIFL VALGTLFPIY INTWHGIRNI DRGLVEMARS YGLSGIPLFI HVILPGALPS 
IMVGVRFALG LMWLTLIVAE TISANSGIGY LAMNAREFLQ TDVVVVAIIL YALLGKLADV 
SAQLLERLWL RWNPAYHLKE ATV