Gene ECD_00442 details

Gene Information

• Locus tag: ECD_00442
• Symbol: ybbM
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 485730
• End bp: 486509
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 46%
• Product: predicted inner membrane protein
• Protein accession: ACT42341
• Protein GI: 253976671

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCGC ATAATATTAC TAACGAATCA TTAGCACTGG CATTAATGCT GGTGGTGGTG 
GCAATCTTAA TTAGCCATAA AGAAAAACTG GCGCTGGAGA AAGATATTCT CTGGAGCGTC 
GGGCGAGCGA TAATTCAGCT GATTATTGTC GGCTATGTGC TGAAGTATAT TTTCAGCGTG 
GATGATGCCA GCCTGACATT ATTGATGGTG TTATTTATCT GCTTTAATGC GGCGTGGAAC 
GCGCAAAAAC GCAGTAAATA TATTGCTAAA GCTTTTATCT CATCGTTTAT TGCCATTACG 
GTCGGGGCGG GAATTACCCT GGCGGTGCTG ATTCTCTCAG GGTCGATTGA ATTTATCCCG 
ATGCAGGTGA TCCCTATCGC CGGGATGATT GCCGGTAACG CCATGGTAGC GGTGGGGTTG 
TGTTACAACA ATTTAGGGCA ACGGGTCATT AGCGAACAGC AACAGATTCA GGAGAAACTG 
AGTCTTGGCG CGACGCCGAA GCAGGCTTCA GCGATATTGA TTCGCGACAG TATTCGCGCG 
GCTTTAATTC CGACGGTCGA TTCAGCAAAA ACGGTTGGCT TAGTGAGTTT ACCAGGAATG 
ATGTCCGGGC TGATATTTGC CGGGATTGAT CCGGTGAAGG CGATTAAATA TCAGATTATG 
GTGACCTTTA TGCTGCTCTC AACCGCCAGC TTGTCGACCA TTATTGCCTG CTATTTAACC 
TATCGTAAGT TTTATAATTC GCGCCACCAG TTGGTGGTGA CGCAATTGAA GAAGAAATGA 

 

Protein sequence

MNSHNITNES LALALMLVVV AILISHKEKL ALEKDILWSV GRAIIQLIIV GYVLKYIFSV 
DDASLTLLMV LFICFNAAWN AQKRSKYIAK AFISSFIAIT VGAGITLAVL ILSGSIEFIP 
MQVIPIAGMI AGNAMVAVGL CYNNLGQRVI SEQQQIQEKL SLGATPKQAS AILIRDSIRA 
ALIPTVDSAK TVGLVSLPGM MSGLIFAGID PVKAIKYQIM VTFMLLSTAS LSTIIACYLT 
YRKFYNSRHQ LVVTQLKKK