Gene ECD_00342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00342 
SymbolrdgC 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp374510 
End bp375421 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content52% 
IMG OID 
Productrecombination associated protein 
Protein accessionACT42241 
Protein GI253976571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTGGT TCAAAAATTT AATGGTTTAC CGTCTTAGCC GCGAGATTTC GCTGCGTGCA 
GAAGAGATGG AAAAACAGCT AGCCTCGATG GCATTTACCC CATGCGGCAG CCAGGACATG
GCGAAGATGG GCTGGGTTCC TCCGATGGGA TCGCACAGCG ATGCGTTAAC GCACGTTGCC
AATGGTCAAA TTGTTATCTG CGCGCGCAAA GAAGAAAAAA TCCTCCCGTC TCCGGTGATT
AAACAGGCGC TGGAAGCGAA AATCGCCAAA CTGGAAGCGG AACAGGCGCG TAAGCTGAAG
AAAACCGAAA AAGATTCGCT GAAAGACGAA GTGCTGCACT CTCTGCTGCC GCGTGCTTTC
AGCCGTTTTA GCCAGACAAT GATGTGGATC GACACGGTTA ACGGTTTGAT TATGGTGGAC
TGCGCCAGTG CCAAAAAAGC GGAAGATACG CTGGCATTAC TGCGTAAAAG CCTGGGGTCG
TTACCGGTTG TACCATTGAG CATGGAAAAC CCGATTGAAC TGACGCTGAC CGAATGGGTT
CGCTCCGGTA GTGCGGCACA GGGCTTCCAG CTGCTTGATG AAGCCGAGCT GAAATCGTTG
CTGGAAGATG GCGGCGTGAT CCGCGCGAAG AAACAAGATC TGACCAGCGA AGAGATCACC
AATCACATTG AAGCCGGAAA AGTGGTGACT AAACTGGCGC TCGACTGGCA GCAGCGCATT
CAGTTTGTGA TGTGCGACGA TGGTTCGCTC AAGCGTCTGA AGTTCTGCGA CGAGCTGCGC
GATCAAAACG AAGATATCGA CCGTGAAGAT TTCGCCCAGC GTTTTGATGC CGATTTCATC
CTGATGACTG GTGAACTGGC AGCGTTAATT CAAAACCTGA TTGAAGGATT AGGTGGCGAA
GCACAACGTT AA
 
Protein sequence
MLWFKNLMVY RLSREISLRA EEMEKQLASM AFTPCGSQDM AKMGWVPPMG SHSDALTHVA 
NGQIVICARK EEKILPSPVI KQALEAKIAK LEAEQARKLK KTEKDSLKDE VLHSLLPRAF
SRFSQTMMWI DTVNGLIMVD CASAKKAEDT LALLRKSLGS LPVVPLSMEN PIELTLTEWV
RSGSAAQGFQ LLDEAELKSL LEDGGVIRAK KQDLTSEEIT NHIEAGKVVT KLALDWQQRI
QFVMCDDGSL KRLKFCDELR DQNEDIDRED FAQRFDADFI LMTGELAALI QNLIEGLGGE
AQR