| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00270 |
|---|
| Symbol | betT |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 299091 |
|---|
| End bp | 301124 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | choline transporter of high affinity |
|---|
| Protein accession | ACT42169 |
|---|
| Protein GI | 253976499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC TTTCACACAG CAGGGAAAAG GACAAAATCA ATCCGGTGGT GTTTTACACC
TCCGCCGGAC TGATTTTGTT GTTTTCCCTG ACAACGATCC TGTTTCGCGA CTTCTCGGCC
CTGTGGATTG GCCGCACGCT GGACTGGGTT TCTAAAACCT TCGGTTGGTA TTATCTGCTG
GCGGCAACGC TCTATATTGT CTTTGTGGTC TGTATCGCTT GTTCGCGTTT TGGTTCGGTG
AAGCTCGGGC CAGAACAATC CAAACCGGAA TTCAGCCTGC TGAGTTGGGC GGCGATGCTG
TTTGCTGCCG GGATCGGTAT CGATCTGATG TTCTTTTCCG TAGCCGAACC GGTAACGCAG
TATATGCAGC CGCCGGAAGG CGCGGGACAG ACGATTGAGG CCGCGCGTCA GGCGATGGTC
TGGACGCTGT TTCACTACGG CTTAACCGGC TGGTCGATGT ATGCGCTGAT GGGCATGGCG
CTCGGATACT TTAGCTATCG TTATAATTTG CCGCTCACCA TCCGCTCGGC GCTGTACCCG
ATCTTCGGTA AACGGATTAA CGGGCCGATA GGTCACTCAG TGGATATTGC AGCGGTGATC
GGCACTATCT TCGGTATTGC CACTACGCTC GGTATCGGTG TGGTGCAGCT TAACTATGGC
TTGAGCGTAC TGTTTGATAT TCCCGATTCG ATGGCGGCAA AAGCGGCACT GATCGCCTTG
TCGGTGATAA TCGCCACTAT CTCGGTGACA TCCGGTGTCG ATAAGGGCAT TCGCGTGTTA
TCGGAGCTTA ATGTCGCGCT GGCGCTGGGA TTGATCCTGT TCGTGTTGTT TATGGGCGAC
ACTTCGTTCC TGCTTAATGC ACTGGTGCTG AATGTTGGCG ACTATGTGAA TCGCTTTATG
GGCATGACGC TCAACAGTTT TGCCTTCGAC CGTCCAGTTG AGTGGATGAA TAACTGGACG
CTCTTCTTCT GGGCATGGTG GGTGGCATGG TCGCCGTTTG TCGGCTTGTT CCTGGCGCGT
ATCTCGCGTG GGCGTACCAT TCGCCAGTTC GTGCTGGGCA CGTTGATTAT TCCGTTTACC
TTCACGCTGT TATGGCTCTC GGTGTTCGGC AATAGCGCGC TGTATGAAAT TATCCACGGC
GGCGCGGCAT TTGCCGAGGA AGCGATGGTC CATCCTGAGC GCGGCTTCTA CAGCCTGCTG
GCGCAGTATC CGGCGTTTAC CTTTAGCGCC TCCGTCGCCA CCATTACTGG CCTGCTGTTT
TATGTGACCT CGGCGGACTC CGGGGCGCTG GTGCTGGGGA ATTTCACCTC GCAGCTTAAA
GATATCAACA GCGACGCCCC CGGCTGGCTG CGCGTCTTCT GGTCGGTGGC GATTGGCCTG
CTGACGCTCG GCATGCTGAT GACCAACGGG ATATCCGCGC TGCAAAACAC CACGGTGATT
ATGGGGCTGC CGTTCAGCTT TGTGATCTTC TTCGTGATGG CGGGGTTGTA TAAATCTCTG
AAGGTAGAAG ATTACCGCCG TGAAAGTGCC AACCGCGATA CCGCACCGCG ACCGCTGGGG
CTTCAGGATC GCCTGAGCTG GAAAAAACGT CTCTCGCGCC TGATGAATTA TCCGGGCACG
CGTTACACTA AACAGATGAT GGAGACGGTC TGTTACCCGG CAATGGAAGA AGTGGCGCAG
GAGTTGCGGT TGCGCGGCGC GTACGTGGAG CTAAAAAGCC TGCCGCCGGA AGAGGGACAA
CAGTTGGGGC ATCTGGATTT GTTGGTGCAT ATGGGCGAAG AGCAAAACTT TGTCTATCAG
ATTTGGCCGC AGCAATATTC GGTGCCGGGC TTTACCTACC GCGCACGTAG CGGTAAATCG
ACTTACTACC GGCTGGAAAC TTTCCTGTTA GAAGGCAGCC AGGGCAACGA CCTGATGGAC
TACAGCAAAG AGCAGGTGAT CACCGATATT CTTGACCAGT ACGAGCGGCA CCTTAACTTT
ATTCATCTCC ATCGTGAAGC GCCGGGCCAT AGCGTGATGT TCCCGGACGC GTGA
|
|---|
| Protein sequence | MTDLSHSREK DKINPVVFYT SAGLILLFSL TTILFRDFSA LWIGRTLDWV SKTFGWYYLL
AATLYIVFVV CIACSRFGSV KLGPEQSKPE FSLLSWAAML FAAGIGIDLM FFSVAEPVTQ
YMQPPEGAGQ TIEAARQAMV WTLFHYGLTG WSMYALMGMA LGYFSYRYNL PLTIRSALYP
IFGKRINGPI GHSVDIAAVI GTIFGIATTL GIGVVQLNYG LSVLFDIPDS MAAKAALIAL
SVIIATISVT SGVDKGIRVL SELNVALALG LILFVLFMGD TSFLLNALVL NVGDYVNRFM
GMTLNSFAFD RPVEWMNNWT LFFWAWWVAW SPFVGLFLAR ISRGRTIRQF VLGTLIIPFT
FTLLWLSVFG NSALYEIIHG GAAFAEEAMV HPERGFYSLL AQYPAFTFSA SVATITGLLF
YVTSADSGAL VLGNFTSQLK DINSDAPGWL RVFWSVAIGL LTLGMLMTNG ISALQNTTVI
MGLPFSFVIF FVMAGLYKSL KVEDYRRESA NRDTAPRPLG LQDRLSWKKR LSRLMNYPGT
RYTKQMMETV CYPAMEEVAQ ELRLRGAYVE LKSLPPEEGQ QLGHLDLLVH MGEEQNFVYQ
IWPQQYSVPG FTYRARSGKS TYYRLETFLL EGSQGNDLMD YSKEQVITDI LDQYERHLNF
IHLHREAPGH SVMFPDA
|
|---|
| |