Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_00147 |
Symbol | hrpB |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 164957 |
End bp | 167386 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | predicted ATP-dependent helicase |
Protein accession | ACT42048 |
Protein GI | 253976378 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0534884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGTCGT TGCCCGTTGC TGCCGTCTTA CCTGAATTAC TTACCGCTCT CGATTGTGCG CCGCAGATAT TATTAAGTGC GCCGACCGGA GCCGGGAAAT CAACCTGGCT GCCGCTGCAA CTGCTGGCGC ATCCCGGCAT TAACGGGAAA ATTATCCTCC TGGAGCCGCG TCGTCTGGCG GCGCGTAACG TCGCGCAACG GCTGGCGGAG CTGCTTAACG AAAAGCCAGG CGATACCGTT GGCTACCGGA TGCGTGCGCA AAACTGCGTC GGGCCAAATA CCCGCCTGGA AGTGGTTACC GAAGGCGTGC TGACGCGCAT GATCCAGCGT GACCCGGAAC TGAGCGGTGT TGGATTGGTG ATCCTTGATG AATTTCATGA GCGCAGCTTG CAGGCGGATT TGGCGTTGGC GCTGTTACTC GATGTGCAAC AAGGTCTGCG TGATGACCTT AAACTGCTGA TTATGTCGGC TACGCTGGAC AACGACCGCT TGCAGCAAAT GCTGCCAGAA GCGCCCGTCG TCATCTCAGA AGGGCGCTCG TTTCCGGTTG AACGCCATTA TTTACCGCTG CCCGCGCATC AGCGTTTTGA CGAAGCCGTT GCGGTAGCCA CCGCCGAAAT GCTGCGTCAG GAAAGCGGAT CATTACTGTT ATTTTTACCT GGCGTCGGAG AAATTCAGCG TGTGCAGGAA CAACTGGCTT CGCGCATCGG CAGTGATGTG TTGCTCTGCC CGCTGTATGG CGCGTTGTCG CTGAACGATC AGCGAAAAGC GATCCTCCCG GCACCGCAAG GGATGCGCAA AGTGGTGCTG GCGACCAATA TTGCTGAAAC CAGTTTAACC ATCGAAGGTA TTCGTCTGGT GGTGGATTGT GCCCAGGAGC GTGTGGCGCG TTTTGAGCCG CGCACGGGGC TTACGCGACT GATTACTCAA CGCGTTAGCC AGGCATCCAT GACGCAGCGT GCCGGGCGCG CCGGGCGTCT GGAGCCGGGT ATCTGCCTGC ATTTAATCGC CAAAGAACAA GCAGAACGCT CTGCCGCGCA AAGTGAACCG GAGATCTTAC AAAGCGATCT TTCCGGTTTG CTGATGGAAT TACTGCAATG GGGATGCAGC GATCCGGCGC AGATGAGCTG GCTGGATCAA CCGCCAGTAG TGAATCTAAT GGCCGCGAAA CGTCTGTTAC AAATGCTGGG GGCGCTGGAC GGTGAACGGC TTAGTGCGCA AGGGCAAAAA ATGGCAGCGC TGGGTAACGA TCCGCGTTTA GCGGCAATGC TGGTTAGCGC GAAGAACGAC GACGAAGCTG CTACCGCGGC AAAAATTGCC GCCATTCTCG AAGAGCCGCC ACGGATGGGC AATAGTGACC TGGGCGTGGC GTTTTCGCGC AATCAACCAG CCTGGCAGCA ACGTAGTCAG CAACTGTTAA AACGCTTAAA CGTACGCGGC GGTGAGGCAG ACAGTTCGCT TATCGCGCCG CTACTTGCCG GGGCGTTTGC CGATCGCATT GCTCATCGCC GTGGGCAAGA TGGACGCTAT CAACTGGCAA ACGGCATGGG AGCGATGCTC GATGCCGACG ACGCGCTAAG CCGCCACGAA TGGTTGATCG CACCGTTATT ATTGCAGGGC AGCGCCTCGC CGGATGCGCG GATTTTACTG GCGCTACCGG TCGATATTGA TGAATTAGTA CAACGCTGTC CGCAGCTGGT GCAGCAATCT GACACCGTGG AATGGGATGA CGCGCAAGGT ACGCTGAAAG CCTGGCGTCG GCTGCAAATC GGTCAGTTGA CGGTGAAAGT GCAGCCGTTA GCGAAACCGT CAGAAGACGA GTTGCATCAG GCGATGCTTA ATGGCATCCG TGATAAAGGT TTAAGCGTGC TCAACTGGAC GGCGGAAGCG GAACAGCTAC GCTTGCGTTT GTTATGCGCC GCAAAGTGGT TGCCGGAATA TGACTGGCCT GCGGTTGATA ATGAAAGTTT GTTGGCGACG CTGGAAACGT GGCTGCTGCC ACATATGACC GGCGTGCATT CACTACGCGG CCTGAAATCA CTCGACATTT ATCAGGCACT ACGCGGATTA CTTGATTGGG GAATGCAGCA ACGTCTGGAT AGTGAATTGC CTGCGCATTA CACTGTGCCG ACGGGAAGCC GGATCGCCAT TCGTTATCAT GAAGATAACC CGCCCGCGCT GGCGGTGAGA ATGCAGGAGA TGTTTGGTGA GGCCACCAAT CCGACGATCG CCCAGGGGCG CGTGCCGCTG GTGCTGGAGT TGCTTTCCCC TGCCCAAAGG CCATTACAAA TCACACGAGA TTTGAGCGCC TTCTGGAAAG GAGCGTACCG TGAGGTGCAA AAAGAGATGA AAGGGCGTTA TCCCAAACAT GTCTGGCCGG ACGACCCGGC AAACACTGCA CCGACGCGAC GGACGAAAAA GTATTCGTAA
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Protein sequence | MSSLPVAAVL PELLTALDCA PQILLSAPTG AGKSTWLPLQ LLAHPGINGK IILLEPRRLA ARNVAQRLAE LLNEKPGDTV GYRMRAQNCV GPNTRLEVVT EGVLTRMIQR DPELSGVGLV ILDEFHERSL QADLALALLL DVQQGLRDDL KLLIMSATLD NDRLQQMLPE APVVISEGRS FPVERHYLPL PAHQRFDEAV AVATAEMLRQ ESGSLLLFLP GVGEIQRVQE QLASRIGSDV LLCPLYGALS LNDQRKAILP APQGMRKVVL ATNIAETSLT IEGIRLVVDC AQERVARFEP RTGLTRLITQ RVSQASMTQR AGRAGRLEPG ICLHLIAKEQ AERSAAQSEP EILQSDLSGL LMELLQWGCS DPAQMSWLDQ PPVVNLMAAK RLLQMLGALD GERLSAQGQK MAALGNDPRL AAMLVSAKND DEAATAAKIA AILEEPPRMG NSDLGVAFSR NQPAWQQRSQ QLLKRLNVRG GEADSSLIAP LLAGAFADRI AHRRGQDGRY QLANGMGAML DADDALSRHE WLIAPLLLQG SASPDARILL ALPVDIDELV QRCPQLVQQS DTVEWDDAQG TLKAWRRLQI GQLTVKVQPL AKPSEDELHQ AMLNGIRDKG LSVLNWTAEA EQLRLRLLCA AKWLPEYDWP AVDNESLLAT LETWLLPHMT GVHSLRGLKS LDIYQALRGL LDWGMQQRLD SELPAHYTVP TGSRIAIRYH EDNPPALAVR MQEMFGEATN PTIAQGRVPL VLELLSPAQR PLQITRDLSA FWKGAYREVQ KEMKGRYPKH VWPDDPANTA PTRRTKKYS
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