| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00143 |
|---|
| Symbol | yadB |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 162038 |
|---|
| End bp | 162964 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | glutamyl-Q tRNA(Asp) synthetase |
|---|
| Protein accession | ACT42044 |
|---|
| Protein GI | 253976374 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000965107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCGC CTTATTTTTT GTTCAAAGAG ATGACAGACA CACACTATAT TGGCCGCTTC
GCCCCCTCTC CTTCCGGCGA GCTTCATTTT GGTTCTCTGA TTGCTGCGCT TGGCAGCTAT
TTGCAGGCTC GCGCCCGGCA AGGTCGCTGG CTGGTACGTA TAGAAGATAT CGACCCGCCT
CGTGAAGTTC CCGGTGCCGC AGAAACTATC CTGCGCCAGC TGGAACATTA CGGTCTGCAC
TGGGACGGCG ATGTTCTCTG GCAATCGCAA CGTCACGACG CCTATCGTGA AGCACTCGCC
TGGTTACATG AGCAAGGGCT AAGTTATTAC TGCACCTGCA CGCGTGCGCG TATTCAAAGC
ATTGGCGGTA TTTACGACGG TCATTGCCGG GTGTTGCATC ATGGACCAGA CAACGCCGCA
GTGCGTATCC GCCAGCAGCA TCCGGTCACG CAATTTACTG ACCAGCTGCG CGGCATTATT
CACGCCGACG AAAAACTGGC ACGGGAAGAT TTTATTATTC ATCGCCGTGA TGGTTTGTTT
GCCTATAACC TGGCGGTGGT GGTGGATGAT CACTTCCAGG GCGTGAGCGA AATTGTCCGC
GGGGCAGATT TGATCGAACC GACAGTGCGG CAAATCTCGC TGTACCAGCT TTTTGGCTGG
AAAGTGCCAG ATTACATTCA TCTGCCGCTG GCGCTTAATC CACAAGGCGC TAAACTTTCC
AAGCAGAATC ATGCGCCTGC GTTGCCGAAA AGCGATCCAC GCCCGGTACT AATCGCGGCA
CTTCAATTTC TGGGTCAGCA GGCAGAAGCA CACTGGCAGG ATTTCAGCGT CGAGCAAATC
CTCCAGTCAG CCGTCAAAAA CTGGCGGCTT ACCGCCGTGC CTGAGTCAGC AATTGTAAAT
TCAACATTCT CAAATGCGTC ATGCTGA
|
|---|
| Protein sequence | MLPPYFLFKE MTDTHYIGRF APSPSGELHF GSLIAALGSY LQARARQGRW LVRIEDIDPP
REVPGAAETI LRQLEHYGLH WDGDVLWQSQ RHDAYREALA WLHEQGLSYY CTCTRARIQS
IGGIYDGHCR VLHHGPDNAA VRIRQQHPVT QFTDQLRGII HADEKLARED FIIHRRDGLF
AYNLAVVVDD HFQGVSEIVR GADLIEPTVR QISLYQLFGW KVPDYIHLPL ALNPQGAKLS
KQNHAPALPK SDPRPVLIAA LQFLGQQAEA HWQDFSVEQI LQSAVKNWRL TAVPESAIVN
STFSNASC
|
|---|
| |