Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_00041 |
Symbol | caiC |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 40466 |
End bp | 42034 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | crotonobetaine/carnitine-CoA ligase |
Protein accession | ACT41943 |
Protein GI | 253976273 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAGAG GTGCAATGGA TATCATTGTC GGACAACATC TACGTCAAAT GTGGGACGAT CTTGCGGACG TTTACGGTCA TAAAACGGCG CTGATTTGTG AATCCAGCGG CGGAGTCGTT AACCGGTATA GTTATCTTGA GTTAAATCAG GAGATTAACC GCACGGCAAA CCTGTTTTAT ACGCTGGGGA TTCGCAAAGG CGACAAGGTT GCACTACATC TCGACAACTG CCCGGAATTT ATCTTTTGCT GGTTCGGGCT GGCAAAAATT GGCGCGATTA TGGTGCCGAT TAACGCCTGC CTGTTACGCG AGGAAAGCGC GTGGATCCTG CAAAATAGCC AGGCGTGCCT GCTGGTAACC AGTGCGCAAT TCTATCCTAT GTATCAACAG ATTCAGCAGG AAGATGCCAC TCAATTGCGG CACATTTGCC TGACAGATGT GGCACTTCCC GCTGATGATG GCGTGAGTTC GTTTACTCAA CTGAAAAATC AACAACCTGC CACCTTGTGC TATGCACCGC CGCTATCGAC TGACGATACG GCGGAAATTC TCTTCACCTC CGGCACCACC TCCCGACCGA AAGGTGTGGT GATTACCCAT TACAACCTGC GCTTCGCTGG ATATTACTCC GCCTGGCAGT GTGCACTGCG TGACGATGAC GTCTACCTGA CGGTAATGCC TGCGTTTCAT ATCGATTGCC AGTGTACTGC GGCGATGGCG GCGTTTTCTG CCGGGGCCAC CTTTGTGCTG GTCGAGAAAT ACAGCGCCCG CGCCTTCTGG GGACAGGTAC AGAAGTACCG CGCCACCGTT ACCGAATGTA TTCCGATGAT GATCCGTACC TTGATGGTGC AGCCGCCTTC AGCGAACGAT CGGCAACACC GCCTGCGGGA AGTGATGTTT TATCTCAACT TGTCGGAGCA GGAAAAAGAT GCGTTTTGTG AACGCTTCGG CGTTCGCTTG CTGACGTCTT ATGGGATGAC GGAAACCATT GTGGGCATTA TCGGCGATCG CCCTGGCGAT AAACGACGCT GGCCGTCGAT TGGTCGAGCG GGGTTTTGCT ACGAAGCGGA GATCCGCGAC GATCACAATT GCCCGCTCCC GGCAGGTGAG ATCGGTGAAA TCTGTATTAA AGGCGTACCA GGGAAAACCA TCTTCAAAGA GTATTTTCTC AACCCGAAAG CCACTGCGAA AGTGCTGGAA GCTGATGGCT GGCTGCATAC CGGCGATACC GGATACCGCG ACGAAGAAGG CTTTTTTTAT TTCGTCGATC GCCGCTGCAA TATGATCAAA CGCGGTGGCG AGAATGTCTC CTGCGTGGAG CTGGAAAATA TCATCGCCAC CCATCCGAAA ATTCAGGACA TCGTGGTTGT GGGTATTAAA GATTCGATTC GCGATGAAGC CATCAAAGCA TTTGTGGTGC TGAATGAAGG TGAAACATTG AGCGAAGAGG AATTTTTTCG CTTCTGCGAA CAAAATATGG CGAAATTTAA AGTGCCCTCT TATCTGGAGA TCAGAAAAGA TCTGCCACGT AATTGCTCGG GGAAAATAAT TAGAAAGAAT CTGAAATAA
|
Protein sequence | MDRGAMDIIV GQHLRQMWDD LADVYGHKTA LICESSGGVV NRYSYLELNQ EINRTANLFY TLGIRKGDKV ALHLDNCPEF IFCWFGLAKI GAIMVPINAC LLREESAWIL QNSQACLLVT SAQFYPMYQQ IQQEDATQLR HICLTDVALP ADDGVSSFTQ LKNQQPATLC YAPPLSTDDT AEILFTSGTT SRPKGVVITH YNLRFAGYYS AWQCALRDDD VYLTVMPAFH IDCQCTAAMA AFSAGATFVL VEKYSARAFW GQVQKYRATV TECIPMMIRT LMVQPPSAND RQHRLREVMF YLNLSEQEKD AFCERFGVRL LTSYGMTETI VGIIGDRPGD KRRWPSIGRA GFCYEAEIRD DHNCPLPAGE IGEICIKGVP GKTIFKEYFL NPKATAKVLE ADGWLHTGDT GYRDEEGFFY FVDRRCNMIK RGGENVSCVE LENIIATHPK IQDIVVVGIK DSIRDEAIKA FVVLNEGETL SEEEFFRFCE QNMAKFKVPS YLEIRKDLPR NCSGKIIRKN LK
|
| |