| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_3073 |
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| Symbol | |
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| ID | 4661947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008741 |
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| Strand | - |
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| Start bp | 159736 |
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| End bp | 162396 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639813993 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_961272 |
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| Protein GI | 120586927 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGAATA AGCTGTGCCT TTCCGTCTGC TGTGCGATTC TCGTTCTCAC TGCCTCGTCA
TGCGGGGCGG ACAAGTCATC GGACTTCCTC ACCGAAGGGC GCAAGCTCAT GGACGCGGGC
AATGCCGCGG GCGCGGTGGT GCTGTTCCGC AATGCACTTG AGAAGACCCC CGCCGATTAT
ACACTGCACC TTGAACTGGG CAGGGCCTAT ATCGCCCTTG GCAAGCTCGA CCTCGCCGAG
GGCGAACTGC AGAAGTGCCT GCGCCAGCAA CCCGACGACC CGCCGCTGAA CCTCGCCCTC
GGCGAACTCT ACGTGGCCCG CAACGAACCG GCCAAGGCGC TGCCGCATCT GGCCCGCTAC
GAACAGGGCG CGGGCGAGAC GGCCGTCTCG CGTGAACTGG CGGGGCTGGC CCATGCGCAG
GCGCGGTCGC CGGAAGAGGC GCGCGCGGCC CTCGAACGCT CCATCGCCCT CGACGCCAAG
CGCGTCACGC CACGTCTGGC GCTGGCGCGG CTGTTCCTCT ACAGGGGCGA CCTCAAGCGC
GCCGTCGCCA CCGTGGACGA GGCACTCGCC GTCGCCCCCG AAGACAGGTC GGCCCTCACG
CTGCGTGGCG ACCTGCTGCT GCGGCAGGGC GACGCGCCCG GTGCGCTGGT GGTGTTCCGC
AAGGTCGCCA GCCTGGCCCC CGGCGACGAC TATGCCCGCT ACATGTCGGG CCTTCTGGCC
CTGCAGACCG GCGACGAGGC CGGGGCCGCC GCCGTTGCGG CATCCATGAA CAAGGACTTC
AAGGACAACT CGCTGACCCT GATGCTGGAC GGCGCCCTCG CCGCGCAGCG CAAGGACTAC
ACGCTTGCGG CGTCGCTGTT CCAGCGCAGC GTGGCCATGC GTCCAAGCCT CGAGGGCTAC
TACAAGCTTG GCATGGCCCT CTACGGCAAG GGCGACCTCG AGACGGCCCT CAGCCAGTTC
AACCGCGTGC TCGAAGCCAC ACCGGAATAC GATGCGGCCC GCCGCATGAC CGTCACCATC
CTGCTTGCGC AACGGCGAGT GGCCGAGGCA CGGCAGGAGG CGCAGAAGCT CGTGGAGCGC
AACCCCTCCG ACGCCGCGGC GCACTTCATG CTGGCCTCGG CGCAGATGGC GGCGGGCGAC
AGGGCCGGGG CCGAACGCTC GTTCGAGGCG GGGCTTGCCC TGCAACCGGC CCATGTGCCC
GCACTCCTGC AACTCAGCCG CCTGAAGCAG GCCGACGGAC GGCCCGACGA GGCGCTTGAA
GACCTCAAGG CCGCCGTTGT CGCCGCACCC GACGACCTCG CCGTGCGCAA CGCCCTCTTC
GCCTACCATC TGGGGCGGGG CGACACGGGC AAGGGCGTCC AGGTCGTCCT CGAGGGCCTG
CGTGGCACTC CGCAGGACGC CATCCTCTAC ACCATGCTGG TGCCCGTCTA CGTCAACATG
GGCGACGAGG CGAAGGCCCT CGACGCGGTG GCGCAGGCGC ACAGGGCCGA CCCCGACTTC
CCCGACGCCT ACCTCGCCGG GCTGCGCCTC CACGCCGGGG CCGGCAGGGC TGAACAGGCC
CTTGCCGAGA GCGAGGCCTA TCTCGCCCGC AAGCCCGATG CACCCGGCTT CCTGCTGGCG
TCGGGCGCCC TGCTCGACCT TCTTGGCAGG ACGGCGGAGG CCGACGCCCG CTTCGACAAG
GCGCTGGCCG CCAACGACCC CCGCGTCTCG TTCGCGGTGG CCGAACGCGC CGTGGCCTCG
GGGCAGGACG AGAAGGCCCG TAGCGTTCTC GAAGAGGCCC TGCGTCAGCA CGACCAGACG
ACCCTGCGCG ACGCGCTCGC CATCCAGCTT GCGCGCATGG GCAAGCCCGA CGACGCGCTC
GCCCTCTATA CCGCCATCGA GACGCAACGC CCGCGCGAGG CGCTGCTGGG CCGCTACCGG
CTGCTGACGC ACCTCGACCG GCATCAGGAG GCGGCGGACA CGGCACGTGA ACTGGGACGG
CGTGAGAGCG CGTCGCCGCT GCCAGTCCTG CTCGAAGCCG CCGCGTTCGA GCGCATGGGG
CAGCGCCCGC AGGGCGTGGC CCTGCTCGAA GCGGCCCACC GCAAGAGCGG CGACCCCGAA
CTGCTGCTGG CCATGGGCGG TATGCTCGAA CGCAACGGCG ACGAGGCCCG TGCCGAGACC
TGCTACCGCG ACGCCCTCAA GGCGCGGCCC GACCATGTGC CCACCCTGCT GGCCTACGCG
GGGCTGGACA TGCGCCGCAA GGAATACGCC AAGGCCACGG CCCTCTACGA GAAGGCCGTG
AGCATCGCCC CCGACGACGT GGTGGCGCTG AACAATCTCG CCATGGCCTA CCTCGAGAAG
GCCAGCCGTG ATGCGACGCC GCAGAAGGCC CTGCGTCTGG CGTTGCAGGC TTACACCCGC
GCTCCCGACA ACCCCGCCGT GCTCGACACC CTCGGCGTGT GCATGATGGC CAACGGACGT
GCCGACGACG CAGCGCGCGC CTTCGGTCGT GCCGTGGTCG CCGTGCCCGG CAACCCGTCG
CTGCGCTACC GCCATGCCGA GGCGCTCTTC AAGGCGGGCC GCAAGGACAT GGCGGCTGAA
GAACTGCGTG TGGCCCTTCA GACGCCCGAC TTCCCCGAGG CGGCCAAGGC ACGCGACCTG
TTGCGCAAGA CCGGCAACTG A
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| Protein sequence | MWNKLCLSVC CAILVLTASS CGADKSSDFL TEGRKLMDAG NAAGAVVLFR NALEKTPADY
TLHLELGRAY IALGKLDLAE GELQKCLRQQ PDDPPLNLAL GELYVARNEP AKALPHLARY
EQGAGETAVS RELAGLAHAQ ARSPEEARAA LERSIALDAK RVTPRLALAR LFLYRGDLKR
AVATVDEALA VAPEDRSALT LRGDLLLRQG DAPGALVVFR KVASLAPGDD YARYMSGLLA
LQTGDEAGAA AVAASMNKDF KDNSLTLMLD GALAAQRKDY TLAASLFQRS VAMRPSLEGY
YKLGMALYGK GDLETALSQF NRVLEATPEY DAARRMTVTI LLAQRRVAEA RQEAQKLVER
NPSDAAAHFM LASAQMAAGD RAGAERSFEA GLALQPAHVP ALLQLSRLKQ ADGRPDEALE
DLKAAVVAAP DDLAVRNALF AYHLGRGDTG KGVQVVLEGL RGTPQDAILY TMLVPVYVNM
GDEAKALDAV AQAHRADPDF PDAYLAGLRL HAGAGRAEQA LAESEAYLAR KPDAPGFLLA
SGALLDLLGR TAEADARFDK ALAANDPRVS FAVAERAVAS GQDEKARSVL EEALRQHDQT
TLRDALAIQL ARMGKPDDAL ALYTAIETQR PREALLGRYR LLTHLDRHQE AADTARELGR
RESASPLPVL LEAAAFERMG QRPQGVALLE AAHRKSGDPE LLLAMGGMLE RNGDEARAET
CYRDALKARP DHVPTLLAYA GLDMRRKEYA KATALYEKAV SIAPDDVVAL NNLAMAYLEK
ASRDATPQKA LRLALQAYTR APDNPAVLDT LGVCMMANGR ADDAARAFGR AVVAVPGNPS
LRYRHAEALF KAGRKDMAAE ELRVALQTPD FPEAAKARDL LRKTGN
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