Gene Dvul_2986 details

Gene Information

• Locus tag: Dvul_2986
• ID: 4661973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris DP4
• Kingdom: Bacteria
• Replicon accession: NC_008741
• Strand: -
• Start bp: 48240
• End bp: 48917
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639813906
• Product: type III secretion system needle length determinant
• Protein accession: YP_961185
• Protein GI: 120586840
• TIGRFAM ID: [TIGR02514] type III secretion system needle length determinant

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATT TTCTGAAGAT CGACGCGGAA CGGCTCGACC GTGCCGTCGC CCACGAAGAG 
GGACACAAGA CGCCACCTTC ATCGCAGGAG GTGGACGCCT TCGACCGGGT CATGCAGCGC 
CCCGGCGACG AACGGCAGAA CGGCTCCCAT GACGGCATGG AGGGCGACGG AACGGGCGGC 
GACCGCGACG ACGGAACGGA TGCCGGTACC GACACCCTGC CCGGTGCCAC GGCCTCGCCG 
TTCCAGTTGC TGGGCGGGGC CATGCAGGGG CTGCTCACGC TGCACGGCGC AGAGGCGGCA 
GAGGGCGCAC AGCAGCCCCA CGCCATGACC GATGCCGACA GCCTCGCCAG CACGCTGGTC 
GAGCGCATCC TCGTCTCCTC GCCCGGTTCC GGCACTGCCG AGATTCGCAT CATCCTCGGC 
GACGGCGTGC TGCCCGGTAC CGAGATACAC CTCGCACGCG GGGCCGACGG CCTTCTCTCC 
GTCTCGCTAC AGACCACCGA CCCCGGCTCG TTCCAGAGTC TGGTCGCCGC CCGCGACGGG 
CTGCAACAGC GGCTGGAACG CCTCGAACAG GGGCAGGTGC GCGTGGAGGT GAGTCAGGAG 
GCGCGGCCCG ACGACGGCGA CGCCGACCGC AGGTCGGCAG GCTACATGAC GCAACAACCC 
GACGAGGAGC GACGCTAG 

 

Protein sequence

MADFLKIDAE RLDRAVAHEE GHKTPPSSQE VDAFDRVMQR PGDERQNGSH DGMEGDGTGG 
DRDDGTDAGT DTLPGATASP FQLLGGAMQG LLTLHGAEAA EGAQQPHAMT DADSLASTLV 
ERILVSSPGS GTAEIRIILG DGVLPGTEIH LARGADGLLS VSLQTTDPGS FQSLVAARDG 
LQQRLERLEQ GQVRVEVSQE ARPDDGDADR RSAGYMTQQP DEERR