Gene Dvul_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2973 
Symbol 
ID4661890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008741 
Strand
Start bp33096 
End bp34127 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content62% 
IMG OID639813893 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_961172 
Protein GI120586827 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC TGCTTAACAC GCTCTATGTG ACCACGCAGG GCACCTACCT CGCCAAAGAG 
GGCGAGTGCA TCGTCGTGCG CGTGGGAGAC GAGGTGAGAC TGCGTGTGCC GGTGCACTCC
CTTGGTGGCG TGGTCTGTTT CGGGCAGGTC TCGTGCAGTC CTTTCCTGAT GGGCTTCGCC
GCCGAACGCG GGCTTGGCTT CAGCTTCCTG ACCGAGCACG GGCGATTCCT TGCGCGGGTT
CAAGGCCCCG TATCCGGGAA TGTCCTTCTG CGGCGGGAGC AATACCGCAG GGCCGACTCG
CCGGAAGCCA GCGCCGAGGT GGCGCGAAGC ATCGTCAGCG CCAAGGTCGT CAACGCCCGC
GGCATCCTGC AACGGGCCAT GCGCGACCAT GGTGACAAGG TCAACGGGGC GGCGCTGGAA
GCGGAAGTGC TCCACTTGAG GGACTGCCTC ATGCGCTTGC AACAGCCCGC AGGGCTGGAT
GCCGTGCGCG GCATCGAGGG CGAAGCTGCC AAAGGCTACT TCAGCGTGTT CGACAACCTC
ATCCTGACAC GGGAGGCGGC GTTCCGCTTC GAGGGACGCA GCCGGCGCCC ACCGCTGGAC
AGGGTCAACT GCCTGCTGTC GTTCATCTAT ACGTTGCTCG GGCATGATGT ACGAAGCGCG
CTGGAAGGCG TCGGGCTTGA TTCGGCAGTG GGGTTCCTGC ACCGCGACCG CCCCGGCAGG
CACGGCCTTG CACTTGATGT CATGGAAGAG TTCAGGGCCG TTGTCGCCGA CAGGCTGGCG
CTTTCGCTCA TCAATCTCGG CAAGCTCAAG AAGAACGACT TCGAGATACA GGAGACGGGT
GCCGTCCGGA TGACGGATGA TGCCCGCAAG GCATTGCTCG TGGCATACCA GAAGCGAAAA
CAGGATGAAA TCGTCCATCC CTTCCTGAAA GAACGCATCC CCTTGGGGCT TGTCTTCCAT
GTACAGGCCA TGCTCATGGC AAGGTGGCTT CGCGGCGACA TCGACGGCTA CCCACCCTTT
GTATGGAAAT GA
 
Protein sequence
MKKLLNTLYV TTQGTYLAKE GECIVVRVGD EVRLRVPVHS LGGVVCFGQV SCSPFLMGFA 
AERGLGFSFL TEHGRFLARV QGPVSGNVLL RREQYRRADS PEASAEVARS IVSAKVVNAR
GILQRAMRDH GDKVNGAALE AEVLHLRDCL MRLQQPAGLD AVRGIEGEAA KGYFSVFDNL
ILTREAAFRF EGRSRRPPLD RVNCLLSFIY TLLGHDVRSA LEGVGLDSAV GFLHRDRPGR
HGLALDVMEE FRAVVADRLA LSLINLGKLK KNDFEIQETG AVRMTDDARK ALLVAYQKRK
QDEIVHPFLK ERIPLGLVFH VQAMLMARWL RGDIDGYPPF VWK