Gene Dvul_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2933 
Symbol 
ID4664504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3430521 
End bp3432233 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content69% 
IMG OID639821194 
Producthydantoinase/oxoprolinase 
Protein accessionYP_968371 
Protein GI120603971 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.714431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGC AACGTCCCTT CATCATAGGT GTCGATACCG GCGGAACGTA CACCGACGCC 
GTGCTGGTGG ACTGCGCCAC ACGGGCTGTC GTGGCGTCTG CCAAGCGCCC CACCACCCAT
TTCGACCTCA GTGTGGGTAT GGAACAGGCC CTGCACGCCG TGCTGGAACC GGCAGCCCGC
GGGTGTGACA GGGCGATAGA TGCCGCGCTT ATCATGCCCG ACGGGTGTGT CTCGCCCGTA
GCCATAGGCC GGGTGGCGGT TTCCACCACG CTTGCCACCA ACGCCGTGGT CGAGGGTGTG
GCCGACCAGG CCGTGGGGCT CATCGTCATC GGCTGGGGCA ACCGCATCGA GGTGCCGGGT
GCCGCCGCCA TCAGGCATAT TCCCGGCGGG CACCGCATCG ACGGTACGGA ACAGGAGCCG
CTGGCTCTCG AACCGTTGCT GGACGCTGTC GTCTCCATGC GGGGGCGCGT CGATGCCTAT
GCGGTGTGCA GCCTCATGAG TTTCGCCAAC CCCACACACG AACTTGTGGC GGCGCGCGCC
ATCGCCGCCG TGGACAAGAG CCCCGTATTC TGTTCGCACG AGGTCAGCAG CCGTGCCGGG
ATGCAGGAAC GTGCCGCCAC TGCGGTGCTC AACGCCCGTC TTCTGCCCGT CATGCGTGAT
TTTCTGGACG GTATGAACGC GGCCCTGCAA CGTATCGGCA TCGATGCCGA GGTCGTGGTG
GTGCGGGGCG ACGCCACGGT GATGCCCCTT GCCGACGCGC TGCGCAGTGC CGCGTCGACG
GTGGCCAGCG GGCCTGCCGC CACGGCGGTG TTCGGTGCCG GGGTCGCCAG CGGTGATGCC
CTCATCGTGG ACGTGGGCGG CACGACCACC GACGTGACCT TGCTGCACGA CGGCAAGCCC
GTGCTTGCGG CAGGGGGGAT GGTCGTGGGC GACTGGGTGA CGCATGTGCA GGCGGTGGAG
ATGTTCACGG TGGGCATCGG CGGAGACAGC CTCGTGCGCA TCATGGAAGA CCTGTCCCTG
CATGTGGGCC CCCAGCGGGT GCTGCCCCTG TGCATGGCGG GTGCGCTGCC CGACCCCGGC
GGTCCCGAGG GCTGGCTGGG GGCCAAGCGG CGATGCCGCT GCCTTGTGCC CGTGGCGAAA
TGCCATGACG CAGGTCATGC CAGTCCGGTG CTCGACCTCT TGCGGACGCG CGGCCCCATG
CCGCCGGGGG CTGTCATGCG CGCCCTCGCC ATGCCGGAGA TAACGCTTGA GCAGGAAGTG
GCGGCCCTGG TGCGGCGTCA GGCCGTATGC GAGGCGGGCT TCACGCCCAC CGACGCCCTC
CACGTGCTTG GCCTGCTCGA TTTCGGCGAT GCGGACGCCG CCGCAAGGGG GGCGGCTGCA
CTGGGGCAGG CCCTTGGCTG CGATGGCCTT GAGGCTGCAC GCCGCGTGGT GGCGGCAACC
CGCTGTCGCA TCGAGGATGC GCTGGTGGCG CATGTGGCCA GCCGCGAAGT GGGCGGCAAT
CTTGCCGGCT ATCTTGCGCA TCGGCGTGAA CACGCCCTGC TGCGCATCGA GGTGGGGCTC
AACGTCCCGG TGGTGGGCAT CGGTGCCGCG GCGCGGCATC TGTTGCCGGG AGTGGCCGAG
ACTTTGCGCA CCGGCATCTG CTTTCCTGAA CACTATGATG TGGGCAACGC CCTCGGGGCG
GTCTACCTCG CCCTTGACGG CCCGGGCGCC TAG
 
Protein sequence
MASQRPFIIG VDTGGTYTDA VLVDCATRAV VASAKRPTTH FDLSVGMEQA LHAVLEPAAR 
GCDRAIDAAL IMPDGCVSPV AIGRVAVSTT LATNAVVEGV ADQAVGLIVI GWGNRIEVPG
AAAIRHIPGG HRIDGTEQEP LALEPLLDAV VSMRGRVDAY AVCSLMSFAN PTHELVAARA
IAAVDKSPVF CSHEVSSRAG MQERAATAVL NARLLPVMRD FLDGMNAALQ RIGIDAEVVV
VRGDATVMPL ADALRSAAST VASGPAATAV FGAGVASGDA LIVDVGGTTT DVTLLHDGKP
VLAAGGMVVG DWVTHVQAVE MFTVGIGGDS LVRIMEDLSL HVGPQRVLPL CMAGALPDPG
GPEGWLGAKR RCRCLVPVAK CHDAGHASPV LDLLRTRGPM PPGAVMRALA MPEITLEQEV
AALVRRQAVC EAGFTPTDAL HVLGLLDFGD ADAAARGAAA LGQALGCDGL EAARRVVAAT
RCRIEDALVA HVASREVGGN LAGYLAHRRE HALLRIEVGL NVPVVGIGAA ARHLLPGVAE
TLRTGICFPE HYDVGNALGA VYLALDGPGA