Gene Dvul_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2710 
Symbol 
ID4662535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3155354 
End bp3157624 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content63% 
IMG OID639820959 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_968148 
Protein GI120603748 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.438958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.796256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTG CACGGGTTCC GTGGCGACGC ACACTGGCGT TCCGGGTCGT GGGCGCGGCA 
GCCGTTCCGC TTTTCGTGGC GGTGGTGATC CTCTCGTGGG GCAGCATCAC CTACCAGAAG
TCCCACCTTT TCGATGAACT CTCGAACGGT GCCGACCGCC TGAGCAACAC CATCCGTCTC
GGGGCGCGCT ATGCCATGAT GATCAACGCG CGTGACGAGA TCAACCAGAT CATACGTGAC
GTGTCCGGTC AGAAGGCCAT CGCCTCCATA CGCATCTACA ACAAGGAGGG GGTGATCAAG
TTCTCCGGTG ATGCGTCCGA GGTCGAGGAA CGTACCAACA TCCGCGACGA GGCATGCCGA
CGCTGCCACG AGACGGAACC GCCCCGTCCC TCGCTTTCGC TGCAGGAAAG GGTGCGTGTC
TTCACCGGGC CGGAGGGGCA GCGCTATCTG GGTAGCCTTT CACCCATCTA CAACGAACCC
GGTTGTTCCG GCCCGCCGTG CCACTTTCAT CCTGAAGAGA AACTCGTACT CGGAGCCCTT
GATGTGGTGC TACCCCTCGA AGGGGCCGAG AGCGAAATCC TATCCTTCCA GCGCCGGGTC
ATCCTGCTGG CGGCGGCGGT GTTCCTGCTT GGCGGCGGCG GCATCGCCCT GTTGCTGGAC
AGGTTCCTCA CCCGTCCCGT GGGCGTGCTC ATCGAAGGTA CGCGCCGGGT GGCGCGGGGC
GAGGCGGTCA ACCTCAATGC CGTGCGGCAG GGCGACGAGA TAGGTGAACT GGCGCGTGCC
ATCTCACGCA TGTCGCGCGA CATCGTCGAC AAGCAGGAGG AGTTGAATCG CCAGCGTGAC
GAGTATCAGC AACTTTTCGA TCAGGTACCG TGCACCATCA CGGTGCAGGA CACGTCGCTT
CGGCTGCTCA AGTACAACCG GGAGTTCCGC GAACGCTTCA ATCCCACACC CGGCGAGCAT
TGCTTCAAGG CATACAAGGG GCGCACCGAC AAGTGTCCGC ATTGCGCCGT GGCGCGCACC
ATGGAAACCG GGTTGCCGCA CTGCAGCGAG GAAAGCGGTT ACAACGCGGA TGGAACGCGC
GCGCACTGGC TGGTGCACAC GACGCCCGTC TTCAACGCGG AAGGCGCCGT CGTCGCAGCC
ATGGAGATGT GCCTCGACAT CACGGCACGC AAGGAACTCG AAGAGCGCCT TCGGCGTTCC
GAACTCAAGT ACCACGCCAT CTTCAACAAC ATCCCCAGTG CCGTGTTCGT CCTCGAAGAG
GCGTCGCTGG ACATCATCGA CTGCAACTCC ACTGCAGAGG CCGTCTACGG GTGGAAGGCC
GAAGAGGTGC GCGGACGTAA CTTCCTCCAT CTGTTCGCCC CCGACGAGCG CGAACGGTAT
GCCTCGCAAC TCCGGGCCTT CACCGTGCTC AACCGGGCGC GTCATTTCAA GCGCGACGGC
ACGCCCTTCT TCGTGGACAT CATGCTCTCG CCCTCGGAGT ACAACGGACG GCAGGTCTTG
CTGCTGACCA CCAGCGACAT CACACAGCGA CTCGAGGCGG AACAGAAGGT CATTCAGGCG
GGCAAGATGG CAACGCTGGG CGAAATGGCC ACCGGGGTCG CCCATGAGTT GAACCAGCCG
CTCACGGTCA TCAAGGCCGC CAGCGGGTTC TTGCTGCGCA AGGCACGCAA GGGCGAGCCC
GTCGCCCCTG ACGTCCTGTC GACCATGACG GCGGAGATGG ACGCCCATGT GGACAGGGCA
AGTCGCATCA TCGAGCACAT GCGCGAATTC GGACGTAAAT CCGACATCGT ACTGGAAAGG
GTGTCCGTCA ATGAGGTGCT GCGCTCCGCC ACCGAGTTCT TCAGCAGACA GATGACCGTG
CGGGGCATCA CCATCGAATG GCAGCTGGAC GCGAGCGAAC CCGTGGTCAT GGCCGTGGCG
AACCGCCTCG AGCAGGTGGT CATCAATCTT CTGCTCAATG CCCGGGATGC CATCGAGGAG
CACGCCGCGG CGCATGATGC GCGACGGGTC ATCACCCTGC GTACCGAAAC GGACGGGCGC
GAGGTGGTCA TGGAGGTGTG CGACTCGGGC CCCGGCATCC CGCGTGCCTT GCAGCAGCGC
ATCTTCGAGC CGTTCTTCAC GACGAAGAAG GTGGGCAAGG GCACGGGGCT GGGCCTTTCC
ATAAGCTACG GTCTGGTCAA GGACTTCGGC GGCAGCATCT CGGTCGGTGA CGCCCCGGGG
GGCGGGGCCC GTTTCACCGT GCGCATGCCC GATGCAGGGA GGAATGCATG A
 
Protein sequence
MDSARVPWRR TLAFRVVGAA AVPLFVAVVI LSWGSITYQK SHLFDELSNG ADRLSNTIRL 
GARYAMMINA RDEINQIIRD VSGQKAIASI RIYNKEGVIK FSGDASEVEE RTNIRDEACR
RCHETEPPRP SLSLQERVRV FTGPEGQRYL GSLSPIYNEP GCSGPPCHFH PEEKLVLGAL
DVVLPLEGAE SEILSFQRRV ILLAAAVFLL GGGGIALLLD RFLTRPVGVL IEGTRRVARG
EAVNLNAVRQ GDEIGELARA ISRMSRDIVD KQEELNRQRD EYQQLFDQVP CTITVQDTSL
RLLKYNREFR ERFNPTPGEH CFKAYKGRTD KCPHCAVART METGLPHCSE ESGYNADGTR
AHWLVHTTPV FNAEGAVVAA MEMCLDITAR KELEERLRRS ELKYHAIFNN IPSAVFVLEE
ASLDIIDCNS TAEAVYGWKA EEVRGRNFLH LFAPDERERY ASQLRAFTVL NRARHFKRDG
TPFFVDIMLS PSEYNGRQVL LLTTSDITQR LEAEQKVIQA GKMATLGEMA TGVAHELNQP
LTVIKAASGF LLRKARKGEP VAPDVLSTMT AEMDAHVDRA SRIIEHMREF GRKSDIVLER
VSVNEVLRSA TEFFSRQMTV RGITIEWQLD ASEPVVMAVA NRLEQVVINL LLNARDAIEE
HAAAHDARRV ITLRTETDGR EVVMEVCDSG PGIPRALQQR IFEPFFTTKK VGKGTGLGLS
ISYGLVKDFG GSISVGDAPG GGARFTVRMP DAGRNA