| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2629 |
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| Symbol | |
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| ID | 4663452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 3063030 |
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| End bp | 3064853 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639820876 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_968068 |
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| Protein GI | 120603668 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAA GCCTACTCAC CGCCATCATT GCCCTGGTCG CAGTCGTCGT AGGCGTACGG
CTGGGGCGGC GGCGCGCCCG CCCGAGACCT GCATCGCCGG ACACGCAGCC GGACACGCCA
CCCGTCCTCT TCGACGACCT GCCCGTGGGT GTGTTCCGGA GCACGCTGGA CGGCGAGCAC
CTGCTCTACG CCAACACGAG TCTCGCACAC CTCTTCGGTT GGCCTGACGC AGGCGCCATG
ATCGAGGGAC AGACCCCGCG CGACCTCTAT GCCTCGCCGA CTGCCCGCGA CGACATCCTT
CAACGCCTGC AGCAAGCTGG CGAGATGACG ACCGACGTCA TCCATCTGCA GCGTCCGGGA
CATGCACAAC GTGCATGCAT CCTGCACCTG CGAATCGACA ACGCCATGAA GACCATCGAG
GGGTGGGTCA TGGATGTCAC GGAACTGGAT CACCGCAAGG AGGGACTCCG CGACGCCCAC
CGTTTCCTGC AAAACGTGGT GGATGCCCTT CCCTGCCCGC TCTTCTTCAA GGACATGAAC
GGAGCCTACA CGCTGTTCAA CCATGCCTTC AGCGACATGC TCGGCCTTAC CCCGGAGAAC
CTGCAAGGCA AGAACGCCGA CGACATCGCA CCTCCCGACC TCGCTGCCGT CTACCACAGC
ATGGACCAGG CGCTCCTTGA CGCCAAGGGC CCAGCAAGCC AGCGCTATGA GTCAGCGTTC
ACAACACCTC ACGGCTTGCG CCATGTGCTC TTCGACAAGG CAACTGTCGT GGATGACGAG
GGCACGGCAC GGGGTCTTGT CGGCATCATC ACCGACATCA CCGGTCGCAA ACAGGCAGAG
GACGCATTGC GCCGGGTCGA GGCGCGCATC CGGGCACTGG TGCACAACGC CTCGGACGGC
TTCTTTTCCG TCACCCCCGA AGGGTACATC ACGGAATCGA ACCCCGCCAT GTGCAAGCTT
TTGGGGTTGA AGGTTGCGCC GTCTTCCGGC GAGAGGGGCG AACTCACATG CGTTGCGCCG
GACGATGACG AGGCGTCCGA TGCGAACAGG GCACAGAACA TCCTCAACCT GCCGGACATG
TTCGCCGAAG GGCGCGAGGC ATGGGATGCA GCCCTGCACA GGCTCGGCAC GGGTGCCCCG
CCCGCCCCCT TCGAGGTCCG GGTGCGCAGG GACGACGGAC AGACGGTGTG GCTTTCACTG
GCCCTGTGGC CCGTCGACTC CGTGCCGGAG GAGGACGGTC CCCCACCCGC CGTGGAAGGC
ATGGCCCACG ACATCACTGC CCACAAACTG GCGGAGATGG ACCTCACCCG CCGCATCGTG
ACCGACCCGC TCACCGGACT CTTCAACCGC GCGCACATGG AGGACATGCT CCCCCGTATG
CTCGCACGGG CGGCTGAAGA CGGAAGGACA CTGGGGCTGC TCTTCATCGA CCTCGACGGG
TTCAAGGCCG TGAACGACAC CTACGGTCAT GCCGTGGGCG ACACCCTTCT CCAGCAGGTC
GCCGGGCGTC TGCGCCGCAG ATTACGGCAT ACGGACATCG CCATACGGCT TGGCGGAGAC
GAATTCGCCG TCCTCCTCTG GGATGTCGCA GGCAAGGAAG CGGTGGAACG CATCGGTGCG
GGCATCCTCT CCATCATGGC CCCGGCGTTC ACCTGTACCG ACATCCCCTG TTCCGTCTCG
GCGAGCATCG GGGCAAGCCT CTACCCCCAA CACGCCGACG ACGCCCCGTC CCTGTTACGA
CTGGCTGATG AAGCCATGTA CAGGGCCAAG GCGGAGGGCA AGAATCGCAT GGCCTTCGCA
GGGCCGTCCA GGGCGGGAGA CTAG
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| Protein sequence | MPESLLTAII ALVAVVVGVR LGRRRARPRP ASPDTQPDTP PVLFDDLPVG VFRSTLDGEH
LLYANTSLAH LFGWPDAGAM IEGQTPRDLY ASPTARDDIL QRLQQAGEMT TDVIHLQRPG
HAQRACILHL RIDNAMKTIE GWVMDVTELD HRKEGLRDAH RFLQNVVDAL PCPLFFKDMN
GAYTLFNHAF SDMLGLTPEN LQGKNADDIA PPDLAAVYHS MDQALLDAKG PASQRYESAF
TTPHGLRHVL FDKATVVDDE GTARGLVGII TDITGRKQAE DALRRVEARI RALVHNASDG
FFSVTPEGYI TESNPAMCKL LGLKVAPSSG ERGELTCVAP DDDEASDANR AQNILNLPDM
FAEGREAWDA ALHRLGTGAP PAPFEVRVRR DDGQTVWLSL ALWPVDSVPE EDGPPPAVEG
MAHDITAHKL AEMDLTRRIV TDPLTGLFNR AHMEDMLPRM LARAAEDGRT LGLLFIDLDG
FKAVNDTYGH AVGDTLLQQV AGRLRRRLRH TDIAIRLGGD EFAVLLWDVA GKEAVERIGA
GILSIMAPAF TCTDIPCSVS ASIGASLYPQ HADDAPSLLR LADEAMYRAK AEGKNRMAFA
GPSRAGD
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