Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2548 |
Symbol | |
ID | 4664144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2976154 |
End bp | 2976903 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639820797 |
Product | extracellular solute-binding protein |
Protein accession | YP_967991 |
Protein GI | 120603591 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.163495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.139391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAGAT CTTTCGTCTA TACCGTCGTC ATGGCTCTGG TGCTCGCCTT CGCCAGCGTG GCCGCAGCCG AAGAGAAGAC CTACATCAAC GGCATCGACG CCAACTATCC GCCCTTCGCC TACGTCGACA AGGACGGCAA GCCCGCCGGT TTCGACGTGG ACTCCATGAA CTGGATAGCC GCCAAGATGG GGTTCAAGGT CGTGCACAAG CCCATGGACT GGGACGGCAT CGTGCCCAGC CTGCTGGCGA AGAAGATCGA CATGGTGTGC TCCGGCATGT CCATCACCGA CGCGCGCAAG AAGCAGATCA CCTTCTCCGA GCCCTACTGG ACGGTCTCGC AGGTGTTCGT GGCCAAGAAG GACAGCAAGC TCTCCGTGGA TGACGTCTAC AAGGGCAAGA AGAAGCTGGG CGTGCAGCGC GGCACCTCTG AAGCCGACGC CCTCCAGAAG CAGGCCCCCG AAAAGGGCTG GAACTTCGAA CTGCGCTTCT ACGATTCGGC CCCGCTCGCC ATCGAGGACG TGCTGAACGG ACGCATCGAC GCCGCAGGCA TGGACATCCT GCCCGCCGAA GACGCCGCCG CCAAGAAGCC CGTCAAGATC CTCGGCACCT TCGGTGAGCC CGAAGACTTC GGCGTGGCCA CCCGCAACGA AGACACCGAA CTTCGCGGCA AGATCAACGA AGGCTACAAG CTGCTCATGG CCGACCCCTA CTGGCAGCAG CTGAAGGACA AGTACCTCCA GAAGAAGTAG
|
Protein sequence | MKRSFVYTVV MALVLAFASV AAAEEKTYIN GIDANYPPFA YVDKDGKPAG FDVDSMNWIA AKMGFKVVHK PMDWDGIVPS LLAKKIDMVC SGMSITDARK KQITFSEPYW TVSQVFVAKK DSKLSVDDVY KGKKKLGVQR GTSEADALQK QAPEKGWNFE LRFYDSAPLA IEDVLNGRID AAGMDILPAE DAAAKKPVKI LGTFGEPEDF GVATRNEDTE LRGKINEGYK LLMADPYWQQ LKDKYLQKK
|
| |