Gene Dvul_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2488 
Symbol 
ID4664432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2902265 
End bp2903410 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content63% 
IMG OID639820737 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_967931 
Protein GI120603531 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.619442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG CGCTCATCAC CGGCATCACC GGGCAGGACG GGGCCTACCT CGCCGAATTC 
CTGCTTGCCA AAGGCTATGA GGTGCACGGC ATCAAGCGCC GGGCCTCGCT TTTCAATACC
GACCGCATCG ACCACCTCTA TCAGGACCCG CACGAGAAGC GCAGACGGTT CATCCTGCAT
TACGGCGACA TGACCGATGC CAGCAATCTC ATCCGCATCG TGCAGGAGGT GCAGCCCGAC
GAGGTCTACA ACCTCGCGGC GCAGAGTCAT GTGAAGGTGT CGTTCGAACT GCCCGAATAT
ACGGCCAATG TCGACGCACT GGGGCCGTTG CGGCTGCTTG AGGCCATTCG CATCCTCGGC
CTGGAGAAGA GCACGCGCTT CTATCAGGCC TCCACATCGG AGCTTTTCGG GCTGGTGCAG
GAAGTGCCGC AGACGGAACG CACCCCCTTC TATCCGCGTT CACCTTACGC CTGCGCCAAA
CTCTATGCCT ACTGGATAGC GGTCAACTAC CGCGAGGCCT ACGGCATGTA TGCCTGCAAC
GGCATCCTCT TCAACCACGA GTCGCCCGTG CGCGGCGAGA CCTTCGTCAC GCGCAAGATA
ACCCGTGCGC TGGCGCGGAC AGTGCTTGGT CTGACCAACG GTCTGCATCT CGGCAACCTC
AACGCCCTGC GCGACTGGGG ACACGCCCGC GACTATGTGG AGATGCAGTG GCTGATGCTG
CAACAGGACA AGCCCGAGGA TTTCGTCATC GCAACAGGGC ATCAGTATTC GGTGCGCGAC
TTCGTGGCTA CGGCTGCGGG TGAACTCGGC ATTGCGCTGG AGTGGCGCGG TGAGGGCGTG
GACGAGAAGG GTGTTGTCAC GTCGGTGGAT GCGAAGGCGC TGGAACGGTT GACCGGTGCC
GCCGGGGCTT CGTGCCCCGT GAAGCCGGGC GACGTTCTGG TGCAGGTCGA CCCGCGCTAC
TTCCGTCCCA CCGAGGTCGA GACGCTGCTG GGCGACCCGA CGCGGGCCCA TGAACGCCTC
GGATGGAAAC CGCGGACGAC CTTCGCCGAC ATGGTGGCGG AGATGGTCCG CGAGGACGTG
AACCTCGCCC GCCGCGACGC CGTATGCAAG GTGGCCGGTT TCAGGGCCTT CAGTTACAAC
GAATAG
 
Protein sequence
MKRALITGIT GQDGAYLAEF LLAKGYEVHG IKRRASLFNT DRIDHLYQDP HEKRRRFILH 
YGDMTDASNL IRIVQEVQPD EVYNLAAQSH VKVSFELPEY TANVDALGPL RLLEAIRILG
LEKSTRFYQA STSELFGLVQ EVPQTERTPF YPRSPYACAK LYAYWIAVNY REAYGMYACN
GILFNHESPV RGETFVTRKI TRALARTVLG LTNGLHLGNL NALRDWGHAR DYVEMQWLML
QQDKPEDFVI ATGHQYSVRD FVATAAGELG IALEWRGEGV DEKGVVTSVD AKALERLTGA
AGASCPVKPG DVLVQVDPRY FRPTEVETLL GDPTRAHERL GWKPRTTFAD MVAEMVREDV
NLARRDAVCK VAGFRAFSYN E