Gene Dvul_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2487 
Symbol 
ID4662109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2897670 
End bp2902277 
Gene Length4608 bp 
Protein Length1535 aa 
Translation table11 
GC content62% 
IMG OID639820736 
Productsignal transduction histidine kinase with CheB and CheR activity 
Protein accessionYP_967930 
Protein GI120603530 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.162467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.455724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAC CCCGTCTCGA CATTTCCCCA ACAGCGCCCT CCGGCACGTT GCCGGAAGAG 
AATGCCGTGC CTCGGCAGGT CGACAGCCAT CGCGCCGCGA ATGGGCGTAC CGAGCACCAC
CCCACCACGC ATGATGCTGT GCCTCTTCCC CTTGTCGTCG GCATAGGGGC CTCGGCCGGG
GGACTGGAAG CCCTTGAGGG CCTCTTCAGG CATATGCCCA CCACCACCGG GGCCGCGTTC
GTGGTCATCC AGCATCTGTC ACCCGATTTC CCAAGCTTCA TGGACGAACT GCTCGCCCGC
CAGACAGCCA TGTCCATCGT CGTTGTGCAG GATGGCATGT GCCCGGCACC CGACCACATC
TACCTGTTGC CGCCCGGCAA GGAGATGGAG ATAACGCTGG ACGGTTTCGT CCTGCGCGAC
AAGTCTTCAT ATGACAACCG CCCCTCCATG CCCATCAACA CCTTCTTCGC CTCCCTCGCC
GCATGGTATG GAGAGAACGC CGCAGGGGTC GTCCTTTCCG GCACCGGCAC CGACGGGGCG
TCGGGGCTGG AGGCCATCTC CGCCGCCGGA GGTCTGGTTC TCGTCCAACT CCCCGAAAGC
GCGGCTTTCG ATGGCATGCC CAAAGCAGCA GCCGCGGCCT GCCGGGCTGC CGTGCTTGCC
ACTCCAGACG AAATGCCGGA CATACTCGCC GCCTTCATAT CGGGCTCGCC ACTTCCGTTC
GAACATCCCG GCCTGCCTGC CGACCCCGCC TCCGGAGGCC CTGCCCCCGA CGCGCTGCAG
ACCATCTTCA CGCTGCTGCA ACGCCATGGC GGGCTCGACT TTCGCGACTA CAAACCGGCC
ACCATCGCAC GGCGCATCAT GCGCCGCATC CGGCTTGAAC AACATGCCGA CATCGAAGGT
TATGCCCGGC ACCTTCGTGA CGACCCGCAA GCGGTGCAGA CCCTGTTCCG CGACCTGCTC
ATCGGGGTGA CGACCTTCTT CCGGGATGAA GCCGCCTTCG ACACACTCGC CGCCACAGTC
ATACCGGAAC TTTTCAGGAG ACTGGGCGAC CGGGGTGAAA TCCGGCTGTG GGTCGCCGGA
TGCGCCAGCG GCGAAGAGGC CTATTCCCTC GGGATGCTGT TGCTGGAAGC CGCCCCGCAG
TTCGATTTCA CGGGGCGCAT CTCCATCTTC GCGACCGACG TCCACAGGCA CTCCCTCGAC
CGCGCCTCGG CAGGGGTCTA CACGAAAGAC AGCCTGCAGG CCCTCTCACC CCGACGGCTG
CAACGATTCT TCATTCCCGA AGGTGATGAG ACCTACAGGG TCGCCCCGGA GTTGCGGTCT
CTGGTGCTGT TCACGCAGCA CAACATCCTC GCCGACCCGC CCTTCACCCG TGTCGACCTC
GTCAGTTGCA GAAACCTCCT CATCTATTTC GGGGTGGATG CACAGGAGAG GGCCATCGCC
CGGTTGCATA TGGCCCTGCG CCCCGGCGGT GTCCTGTTCA TGGGAGCGAG CGAGACCACA
GGACGCTTGC ATCCCATCTT CGAACCTCTC GACCCGCGGT TACGCATCTT CACGAAACGT
CCCGACACCC ACGGCATGAC GGCAACCCAT CTGGTGCACC CGGCTGTCAT CGACGTGCAC
CGCCTGGCCA CATCCTCGCC ACAACCCTCT GAACGACAAC TGCTGCGCGA CTACGACGCG
CTTCTGCAAC GTTTCGCCCC GGACGGCATG CTTGTGGACG ACCGCTTTGC CGTGCTGCAT
TTCTTCGGCA ACGGGGCCTC ATATCTCACG CAGCATACCG GGCGCACCGA CCGCCCCATC
ACCGACATGG TCGAGGGCGA CTTGCGCCTT GCCCTCTCCT CCGCGCTGCA ACGGGCTTCT
ACGACCGGGG AGACCGCCCG CTTCAAGAGC ATCCGCGTAC CGGGCAATGG CGGGGACCGC
CTCGTGGATG TCGAGGTCAT GCCCATCGGT AACAAACCAT CCGACGGGAA GCACTACCAC
GTGGCGCTCC AGTCATCGCA CCCTGTGCTC ATCCGGCCTC TTGTCGAACC CGCAGCGACG
GGGCACGGCA CAGGACTGCT GGCGTCACGG GTCGCCGAAC TCGAAACGGA ACTTGCCGAG
ACACGTTCGA GCCTGCGTGA CAGTATCGAA CAGGTGCACG TCACCAACGA GGAATTGCAG
GCCACCAACG AGGAACTGCT CTCGGCCAAT GAAGAACTGC AGGCGACGAA CGAAGAGCTT
CATTCCATCA ATGAGGAACT CTACACCGTC AACGCCGAAT TCGAGCGCAA GAACGACCAG
CTACGCATTC TTGGAGAAGA CTACGCTCAA CTCTTCGACA CGATTCCCAT CGCCATCGCC
TCGCTGGACG AATCGCTACG GGTGCGGCGT TTCAATGCGG GCATGTCTGC AATCTTCCAC
CTGCAACCCC ACGATGTGGG AAGGCCGCTG CAACAGATCG CCTCATGCCT TGTGGAACCT
GACAATCTCT TCAAATCGCT GGCTCTTGGC CTCAGTGAAG GGGGAACACA CGACAGCGAG
GCACGCCTCA CGGATGGCAG GTGGTGCCAG CAACGCATCC ATGCCGTCCG TGATGAGACA
GGGGCGACAG AGCATATGCT GCTCACCTTC ATGGACATCA CCCACGTCAA ACATGCCGAA
GCCATGCGGC AGGAGGCACG TTCTCTTGAC GAGGTCTCGC GTAACGTTCC CGGCGTGGTG
TTCAAGTTGT GCGCCCCGCA TGATGGTAAC ATCAGGGTCG AGTACGTCGG CGGCGGAACG
GTCGAGTTGT GCGGGCTGTC GCAGGAAGAG ATCAAAGCCG ACCCGCACGC GCTGGTCGCC
TTGTTCGGCC CGGATGTCGT GCCACATATC CTTGCGGGCA TCTCTGCGAC AGACGGGGAA
GGGACGCCTG TGGATGTCGA AATCCCCCTG CATTGCACAG GCGGTACAAA ATGGGTTCAT
GTACAGGCCA CCTCCACTCC GGCACGGGGG GGCGGCACGG AATGGTACGG CGTTGCCGTG
GACGCCACGG AACGACGATA CGACGCGACG CGCATGCATA ATGCCGCCGA CAGGTATCTG
CGCATCCTCG ACCACGCCCC CATGCTCATC TGGCGTAGCG ACACCACTGG TGCATGCGAC
TGGTTCAACA CCACATGGCT CGACTTCACG GGCCGGACCA TGGAACAGGA GTATGGCTAC
GGCTGGGCCG AGGGAGTGCA CCCCGACGAT TACGACCGTT GCGTCAGCAT CTATCAGAAA
GCCTTCGCAC TCCAGCAGGC ATTCGAGATG AACTACCGCC TGAAGCGGCA CGACGGTCAA
TTCCGCTGGC TCGTCGACTG CGGCAAGCCC CTTCCCGACC TCGACGGCAC CTTCTCCGGT
TTCATCGGCT ACTGCTATGA CATCACCGAT GCGGTCAACG CGCTGGAATC CATGTGCGAG
GCGAGCAAAC GCGCCGAAGA GGCAAATCGT ACCAAAAGCG AGTTCCTTGC CAACGTCAGC
CACGAATTGC GCACTCCGCT CAACGGAGCG CTGGGCATGT TACAACTGCT CGAACTGTCG
TCCCTCTCTC CCGAACAGAG GCAGTATGTG ACCACCGCCA TCCGTTCCGG GCAGAACCTC
GTGCGACTGC TCAGCGACAT CCTCGACCTT TCCCGCATCG AGGCGGGCAA GCTTGTCATA
GAAGCCATCC CCTGCGACAT CAAGGAACTG GTGGACGAGG TGTTCTCCAC CTTCAGCCTC
GACGCCACAG GCAAGGGCAT CACGCTGGAG ACGACAATTG CCCCCGGTAC CCCCACCTAC
GTTAGGACAG ACCCTCTGCG CTTGCGGCAG ACGCTGTTCA ACCTTGTCGG CAACGCGGTC
AAGTTCACGG AGAAGGGTGG CGTACGTGTG GAGTTTTCCA CAGCCTCCAT GCGCGGCGAC
GCCATCGTCC TGTTCTGTAC CGTACGCGAC ACCGGTCCCG GCATCCCCGA AGACAGAATC
GAGAGCATCT TCCAGCCCTT CACCCAACTG GACGGCTCCT ACACACGCCG TCACAGCGGA
CTGGGACTCG GCCTTGGCAT CGTATGCAGA CTCATGGAAC TCTTCGGGGG CAGCATCGAA
GTGGAGAGCG CGCCGAACAT GGGTACGGCC ATGCATTTCG CCATCCCGGT CGGAAAGACC
CGGCGCCCGC AGGGCAGGAA GGTCAAGGAG ACGGAGGATG AAGGCGACAG GCATGCCCTG
TACCTGCTCG TGGCGGAAGA CGATGCCATC AATCGCCTCA CCCTGACACG GATGCTGGAA
CAGCTGGGTC ACCGCGCCCA TGCCGTGGAA GACGGCAGTC AGGCCTTGCA GGCTCTCGCG
GAGCAGCATT TCGATGCCGT ATTCCTCGAC ATCCAGATGC CTGTCCTCGA TGGCATGGCC
ACCTTGCAGG CCATCCGTAC GGGACAGGTC GCGGGACTGC CCCCCACCAT TCCGGTCGTG
GCCGTGACCG CACACGCCAT GCAGGGCGAC CGAGAACGGT TCATGGCGAA AGGGGCCGAC
GCCTATGTGC AGAAGCCCTA CGACTTCACA GCACTGGAGA AGGCCCTTGC GACCCTGGGG
CGGCGGGTGC GGCCCGAAGG CCGCACCCGT GAAGACTATT CGTTGTAA
 
Protein sequence
MAAPRLDISP TAPSGTLPEE NAVPRQVDSH RAANGRTEHH PTTHDAVPLP LVVGIGASAG 
GLEALEGLFR HMPTTTGAAF VVIQHLSPDF PSFMDELLAR QTAMSIVVVQ DGMCPAPDHI
YLLPPGKEME ITLDGFVLRD KSSYDNRPSM PINTFFASLA AWYGENAAGV VLSGTGTDGA
SGLEAISAAG GLVLVQLPES AAFDGMPKAA AAACRAAVLA TPDEMPDILA AFISGSPLPF
EHPGLPADPA SGGPAPDALQ TIFTLLQRHG GLDFRDYKPA TIARRIMRRI RLEQHADIEG
YARHLRDDPQ AVQTLFRDLL IGVTTFFRDE AAFDTLAATV IPELFRRLGD RGEIRLWVAG
CASGEEAYSL GMLLLEAAPQ FDFTGRISIF ATDVHRHSLD RASAGVYTKD SLQALSPRRL
QRFFIPEGDE TYRVAPELRS LVLFTQHNIL ADPPFTRVDL VSCRNLLIYF GVDAQERAIA
RLHMALRPGG VLFMGASETT GRLHPIFEPL DPRLRIFTKR PDTHGMTATH LVHPAVIDVH
RLATSSPQPS ERQLLRDYDA LLQRFAPDGM LVDDRFAVLH FFGNGASYLT QHTGRTDRPI
TDMVEGDLRL ALSSALQRAS TTGETARFKS IRVPGNGGDR LVDVEVMPIG NKPSDGKHYH
VALQSSHPVL IRPLVEPAAT GHGTGLLASR VAELETELAE TRSSLRDSIE QVHVTNEELQ
ATNEELLSAN EELQATNEEL HSINEELYTV NAEFERKNDQ LRILGEDYAQ LFDTIPIAIA
SLDESLRVRR FNAGMSAIFH LQPHDVGRPL QQIASCLVEP DNLFKSLALG LSEGGTHDSE
ARLTDGRWCQ QRIHAVRDET GATEHMLLTF MDITHVKHAE AMRQEARSLD EVSRNVPGVV
FKLCAPHDGN IRVEYVGGGT VELCGLSQEE IKADPHALVA LFGPDVVPHI LAGISATDGE
GTPVDVEIPL HCTGGTKWVH VQATSTPARG GGTEWYGVAV DATERRYDAT RMHNAADRYL
RILDHAPMLI WRSDTTGACD WFNTTWLDFT GRTMEQEYGY GWAEGVHPDD YDRCVSIYQK
AFALQQAFEM NYRLKRHDGQ FRWLVDCGKP LPDLDGTFSG FIGYCYDITD AVNALESMCE
ASKRAEEANR TKSEFLANVS HELRTPLNGA LGMLQLLELS SLSPEQRQYV TTAIRSGQNL
VRLLSDILDL SRIEAGKLVI EAIPCDIKEL VDEVFSTFSL DATGKGITLE TTIAPGTPTY
VRTDPLRLRQ TLFNLVGNAV KFTEKGGVRV EFSTASMRGD AIVLFCTVRD TGPGIPEDRI
ESIFQPFTQL DGSYTRRHSG LGLGLGIVCR LMELFGGSIE VESAPNMGTA MHFAIPVGKT
RRPQGRKVKE TEDEGDRHAL YLLVAEDDAI NRLTLTRMLE QLGHRAHAVE DGSQALQALA
EQHFDAVFLD IQMPVLDGMA TLQAIRTGQV AGLPPTIPVV AVTAHAMQGD RERFMAKGAD
AYVQKPYDFT ALEKALATLG RRVRPEGRTR EDYSL