Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2487 |
Symbol | |
ID | 4662109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 2897670 |
End bp | 2902277 |
Gene Length | 4608 bp |
Protein Length | 1535 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820736 |
Product | signal transduction histidine kinase with CheB and CheR activity |
Protein accession | YP_967930 |
Protein GI | 120603530 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.162467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.455724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAC CCCGTCTCGA CATTTCCCCA ACAGCGCCCT CCGGCACGTT GCCGGAAGAG AATGCCGTGC CTCGGCAGGT CGACAGCCAT CGCGCCGCGA ATGGGCGTAC CGAGCACCAC CCCACCACGC ATGATGCTGT GCCTCTTCCC CTTGTCGTCG GCATAGGGGC CTCGGCCGGG GGACTGGAAG CCCTTGAGGG CCTCTTCAGG CATATGCCCA CCACCACCGG GGCCGCGTTC GTGGTCATCC AGCATCTGTC ACCCGATTTC CCAAGCTTCA TGGACGAACT GCTCGCCCGC CAGACAGCCA TGTCCATCGT CGTTGTGCAG GATGGCATGT GCCCGGCACC CGACCACATC TACCTGTTGC CGCCCGGCAA GGAGATGGAG ATAACGCTGG ACGGTTTCGT CCTGCGCGAC AAGTCTTCAT ATGACAACCG CCCCTCCATG CCCATCAACA CCTTCTTCGC CTCCCTCGCC GCATGGTATG GAGAGAACGC CGCAGGGGTC GTCCTTTCCG GCACCGGCAC CGACGGGGCG TCGGGGCTGG AGGCCATCTC CGCCGCCGGA GGTCTGGTTC TCGTCCAACT CCCCGAAAGC GCGGCTTTCG ATGGCATGCC CAAAGCAGCA GCCGCGGCCT GCCGGGCTGC CGTGCTTGCC ACTCCAGACG AAATGCCGGA CATACTCGCC GCCTTCATAT CGGGCTCGCC ACTTCCGTTC GAACATCCCG GCCTGCCTGC CGACCCCGCC TCCGGAGGCC CTGCCCCCGA CGCGCTGCAG ACCATCTTCA CGCTGCTGCA ACGCCATGGC GGGCTCGACT TTCGCGACTA CAAACCGGCC ACCATCGCAC GGCGCATCAT GCGCCGCATC CGGCTTGAAC AACATGCCGA CATCGAAGGT TATGCCCGGC ACCTTCGTGA CGACCCGCAA GCGGTGCAGA CCCTGTTCCG CGACCTGCTC ATCGGGGTGA CGACCTTCTT CCGGGATGAA GCCGCCTTCG ACACACTCGC CGCCACAGTC ATACCGGAAC TTTTCAGGAG ACTGGGCGAC CGGGGTGAAA TCCGGCTGTG GGTCGCCGGA TGCGCCAGCG GCGAAGAGGC CTATTCCCTC GGGATGCTGT TGCTGGAAGC CGCCCCGCAG TTCGATTTCA CGGGGCGCAT CTCCATCTTC GCGACCGACG TCCACAGGCA CTCCCTCGAC CGCGCCTCGG CAGGGGTCTA CACGAAAGAC AGCCTGCAGG CCCTCTCACC CCGACGGCTG CAACGATTCT TCATTCCCGA AGGTGATGAG ACCTACAGGG TCGCCCCGGA GTTGCGGTCT CTGGTGCTGT TCACGCAGCA CAACATCCTC GCCGACCCGC CCTTCACCCG TGTCGACCTC GTCAGTTGCA GAAACCTCCT CATCTATTTC GGGGTGGATG CACAGGAGAG GGCCATCGCC CGGTTGCATA TGGCCCTGCG CCCCGGCGGT GTCCTGTTCA TGGGAGCGAG CGAGACCACA GGACGCTTGC ATCCCATCTT CGAACCTCTC GACCCGCGGT TACGCATCTT CACGAAACGT CCCGACACCC ACGGCATGAC GGCAACCCAT CTGGTGCACC CGGCTGTCAT CGACGTGCAC CGCCTGGCCA CATCCTCGCC ACAACCCTCT GAACGACAAC TGCTGCGCGA CTACGACGCG CTTCTGCAAC GTTTCGCCCC GGACGGCATG CTTGTGGACG ACCGCTTTGC CGTGCTGCAT TTCTTCGGCA ACGGGGCCTC ATATCTCACG CAGCATACCG GGCGCACCGA CCGCCCCATC ACCGACATGG TCGAGGGCGA CTTGCGCCTT GCCCTCTCCT CCGCGCTGCA ACGGGCTTCT ACGACCGGGG AGACCGCCCG CTTCAAGAGC ATCCGCGTAC CGGGCAATGG CGGGGACCGC CTCGTGGATG TCGAGGTCAT GCCCATCGGT AACAAACCAT CCGACGGGAA GCACTACCAC GTGGCGCTCC AGTCATCGCA CCCTGTGCTC ATCCGGCCTC TTGTCGAACC CGCAGCGACG GGGCACGGCA CAGGACTGCT GGCGTCACGG GTCGCCGAAC TCGAAACGGA ACTTGCCGAG ACACGTTCGA GCCTGCGTGA CAGTATCGAA CAGGTGCACG TCACCAACGA GGAATTGCAG GCCACCAACG AGGAACTGCT CTCGGCCAAT GAAGAACTGC AGGCGACGAA CGAAGAGCTT CATTCCATCA ATGAGGAACT CTACACCGTC AACGCCGAAT TCGAGCGCAA GAACGACCAG CTACGCATTC TTGGAGAAGA CTACGCTCAA CTCTTCGACA CGATTCCCAT CGCCATCGCC TCGCTGGACG AATCGCTACG GGTGCGGCGT TTCAATGCGG GCATGTCTGC AATCTTCCAC CTGCAACCCC ACGATGTGGG AAGGCCGCTG CAACAGATCG CCTCATGCCT TGTGGAACCT GACAATCTCT TCAAATCGCT GGCTCTTGGC CTCAGTGAAG GGGGAACACA CGACAGCGAG GCACGCCTCA CGGATGGCAG GTGGTGCCAG CAACGCATCC ATGCCGTCCG TGATGAGACA GGGGCGACAG AGCATATGCT GCTCACCTTC ATGGACATCA CCCACGTCAA ACATGCCGAA GCCATGCGGC AGGAGGCACG TTCTCTTGAC GAGGTCTCGC GTAACGTTCC CGGCGTGGTG TTCAAGTTGT GCGCCCCGCA TGATGGTAAC ATCAGGGTCG AGTACGTCGG CGGCGGAACG GTCGAGTTGT GCGGGCTGTC GCAGGAAGAG ATCAAAGCCG ACCCGCACGC GCTGGTCGCC TTGTTCGGCC CGGATGTCGT GCCACATATC CTTGCGGGCA TCTCTGCGAC AGACGGGGAA GGGACGCCTG TGGATGTCGA AATCCCCCTG CATTGCACAG GCGGTACAAA ATGGGTTCAT GTACAGGCCA CCTCCACTCC GGCACGGGGG GGCGGCACGG AATGGTACGG CGTTGCCGTG GACGCCACGG AACGACGATA CGACGCGACG CGCATGCATA ATGCCGCCGA CAGGTATCTG CGCATCCTCG ACCACGCCCC CATGCTCATC TGGCGTAGCG ACACCACTGG TGCATGCGAC TGGTTCAACA CCACATGGCT CGACTTCACG GGCCGGACCA TGGAACAGGA GTATGGCTAC GGCTGGGCCG AGGGAGTGCA CCCCGACGAT TACGACCGTT GCGTCAGCAT CTATCAGAAA GCCTTCGCAC TCCAGCAGGC ATTCGAGATG AACTACCGCC TGAAGCGGCA CGACGGTCAA TTCCGCTGGC TCGTCGACTG CGGCAAGCCC CTTCCCGACC TCGACGGCAC CTTCTCCGGT TTCATCGGCT ACTGCTATGA CATCACCGAT GCGGTCAACG CGCTGGAATC CATGTGCGAG GCGAGCAAAC GCGCCGAAGA GGCAAATCGT ACCAAAAGCG AGTTCCTTGC CAACGTCAGC CACGAATTGC GCACTCCGCT CAACGGAGCG CTGGGCATGT TACAACTGCT CGAACTGTCG TCCCTCTCTC CCGAACAGAG GCAGTATGTG ACCACCGCCA TCCGTTCCGG GCAGAACCTC GTGCGACTGC TCAGCGACAT CCTCGACCTT TCCCGCATCG AGGCGGGCAA GCTTGTCATA GAAGCCATCC CCTGCGACAT CAAGGAACTG GTGGACGAGG TGTTCTCCAC CTTCAGCCTC GACGCCACAG GCAAGGGCAT CACGCTGGAG ACGACAATTG CCCCCGGTAC CCCCACCTAC GTTAGGACAG ACCCTCTGCG CTTGCGGCAG ACGCTGTTCA ACCTTGTCGG CAACGCGGTC AAGTTCACGG AGAAGGGTGG CGTACGTGTG GAGTTTTCCA CAGCCTCCAT GCGCGGCGAC GCCATCGTCC TGTTCTGTAC CGTACGCGAC ACCGGTCCCG GCATCCCCGA AGACAGAATC GAGAGCATCT TCCAGCCCTT CACCCAACTG GACGGCTCCT ACACACGCCG TCACAGCGGA CTGGGACTCG GCCTTGGCAT CGTATGCAGA CTCATGGAAC TCTTCGGGGG CAGCATCGAA GTGGAGAGCG CGCCGAACAT GGGTACGGCC ATGCATTTCG CCATCCCGGT CGGAAAGACC CGGCGCCCGC AGGGCAGGAA GGTCAAGGAG ACGGAGGATG AAGGCGACAG GCATGCCCTG TACCTGCTCG TGGCGGAAGA CGATGCCATC AATCGCCTCA CCCTGACACG GATGCTGGAA CAGCTGGGTC ACCGCGCCCA TGCCGTGGAA GACGGCAGTC AGGCCTTGCA GGCTCTCGCG GAGCAGCATT TCGATGCCGT ATTCCTCGAC ATCCAGATGC CTGTCCTCGA TGGCATGGCC ACCTTGCAGG CCATCCGTAC GGGACAGGTC GCGGGACTGC CCCCCACCAT TCCGGTCGTG GCCGTGACCG CACACGCCAT GCAGGGCGAC CGAGAACGGT TCATGGCGAA AGGGGCCGAC GCCTATGTGC AGAAGCCCTA CGACTTCACA GCACTGGAGA AGGCCCTTGC GACCCTGGGG CGGCGGGTGC GGCCCGAAGG CCGCACCCGT GAAGACTATT CGTTGTAA
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Protein sequence | MAAPRLDISP TAPSGTLPEE NAVPRQVDSH RAANGRTEHH PTTHDAVPLP LVVGIGASAG GLEALEGLFR HMPTTTGAAF VVIQHLSPDF PSFMDELLAR QTAMSIVVVQ DGMCPAPDHI YLLPPGKEME ITLDGFVLRD KSSYDNRPSM PINTFFASLA AWYGENAAGV VLSGTGTDGA SGLEAISAAG GLVLVQLPES AAFDGMPKAA AAACRAAVLA TPDEMPDILA AFISGSPLPF EHPGLPADPA SGGPAPDALQ TIFTLLQRHG GLDFRDYKPA TIARRIMRRI RLEQHADIEG YARHLRDDPQ AVQTLFRDLL IGVTTFFRDE AAFDTLAATV IPELFRRLGD RGEIRLWVAG CASGEEAYSL GMLLLEAAPQ FDFTGRISIF ATDVHRHSLD RASAGVYTKD SLQALSPRRL QRFFIPEGDE TYRVAPELRS LVLFTQHNIL ADPPFTRVDL VSCRNLLIYF GVDAQERAIA RLHMALRPGG VLFMGASETT GRLHPIFEPL DPRLRIFTKR PDTHGMTATH LVHPAVIDVH RLATSSPQPS ERQLLRDYDA LLQRFAPDGM LVDDRFAVLH FFGNGASYLT QHTGRTDRPI TDMVEGDLRL ALSSALQRAS TTGETARFKS IRVPGNGGDR LVDVEVMPIG NKPSDGKHYH VALQSSHPVL IRPLVEPAAT GHGTGLLASR VAELETELAE TRSSLRDSIE QVHVTNEELQ ATNEELLSAN EELQATNEEL HSINEELYTV NAEFERKNDQ LRILGEDYAQ LFDTIPIAIA SLDESLRVRR FNAGMSAIFH LQPHDVGRPL QQIASCLVEP DNLFKSLALG LSEGGTHDSE ARLTDGRWCQ QRIHAVRDET GATEHMLLTF MDITHVKHAE AMRQEARSLD EVSRNVPGVV FKLCAPHDGN IRVEYVGGGT VELCGLSQEE IKADPHALVA LFGPDVVPHI LAGISATDGE GTPVDVEIPL HCTGGTKWVH VQATSTPARG GGTEWYGVAV DATERRYDAT RMHNAADRYL RILDHAPMLI WRSDTTGACD WFNTTWLDFT GRTMEQEYGY GWAEGVHPDD YDRCVSIYQK AFALQQAFEM NYRLKRHDGQ FRWLVDCGKP LPDLDGTFSG FIGYCYDITD AVNALESMCE ASKRAEEANR TKSEFLANVS HELRTPLNGA LGMLQLLELS SLSPEQRQYV TTAIRSGQNL VRLLSDILDL SRIEAGKLVI EAIPCDIKEL VDEVFSTFSL DATGKGITLE TTIAPGTPTY VRTDPLRLRQ TLFNLVGNAV KFTEKGGVRV EFSTASMRGD AIVLFCTVRD TGPGIPEDRI ESIFQPFTQL DGSYTRRHSG LGLGLGIVCR LMELFGGSIE VESAPNMGTA MHFAIPVGKT RRPQGRKVKE TEDEGDRHAL YLLVAEDDAI NRLTLTRMLE QLGHRAHAVE DGSQALQALA EQHFDAVFLD IQMPVLDGMA TLQAIRTGQV AGLPPTIPVV AVTAHAMQGD RERFMAKGAD AYVQKPYDFT ALEKALATLG RRVRPEGRTR EDYSL
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