Gene Dvul_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2447 
Symbol 
ID4663262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2849205 
End bp2850374 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content68% 
IMG OID639820695 
ProductSerine--glyoxylate transaminase 
Protein accessionYP_967890 
Protein GI120603490 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.372161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACA AACCCCGCCT GCTCACACCC GGCCCCACGC CGCTGCCTGA ACGAGTGCGC 
CTTGTCATGG CGCAGGACAT GATCCACCAC CGCAAACCCG CCTTCAAGAA GCTCATGGGC
GAAGTGCAGG AGAAGTTGCG CATCCTCTTC GGCACCTCAC AGCCGGTGCT GCCGCTTGCC
TGTTCCGGCA GCGGCGCCAT GACCGCCGCC GTACACGGGC TCTTCGTCCC CGGCGAGAAG
GTTATCGTGG TCGAAGGCGG CAAGTTCGGC CAGCGCTGGC GCGAAATAGC GGCCCTGCGC
GGTCTTGAGG TGGTCTCCAT CGTCGTCGAG TGGGGACGTG CCGTCTCCCT TGCCGAAGTC
GAAGCGACCC TCGACGCCCA CCCGGACGCC AAGGGCGTGC TGATGCAGCT TTCCGAGACG
TCCACGGGCG TATTGCACCC GGTGCGCGGC ATCGCCACCG TCACCCGCAA GCGCGACGTG
CTGCTGGTGG CCGACGGCAT CTCCGCCGTG GGCATCTCGC CCTGCCCCAT GGACGAATGG
GGCGTGGACT GTCTGCTGAC GGGTTCGCAG AAGGGGCTGA TGCTGCCTCC CGGCCTCGCG
CTCATCGCGC TCTCCGAAAG GGCGTGGCGC AAGGCCGACA CGGTGGCCCC CTCATGCTTC
TACTTCAACC TGCCCGGCGA ACGCGCCAAC TGCGAGAAGG GACAGACCCT CTTCACCACG
CCCGTCAGCC TCATCGTGGG CCTTGGCGAG AGCCTCGACA TGTTCCTTGA AGCCGGGCTT
GAGACCGTGT ACCGCAAGCA GTGGGCACTC ACCATGCTCG CCCGCGCGGG CACGGCGGCC
CTCGGCCTCG CCCCGCTGGC ACCGGAACGC TTCACATGGG GTCTCACCAG CGTGATGCTG
CCCGCGGGTG TGGACGGCAC CCGGCTGTTG CAGGTCGCCG CCGACAACCA TGGCGTCGTC
ATGGCGGGCG GTCAGGACCA TCTCAAGGGA CGCATCCTCC GCATCGGCCA TATGGGCTGG
GTGGACTGGG CAGACATTGT GGCAGGGCTG CATGCCGTGG CCTCTGGTCT GCGCACCTGC
GGGGCCTATG TGGGCGCGCG CGACTACATC GAGACGGGGC TTGCCGCCTA CGAGGCGGCA
TTGCAGGTGG CGCCGGGTAC TCCGGTCTAG
 
Protein sequence
MLNKPRLLTP GPTPLPERVR LVMAQDMIHH RKPAFKKLMG EVQEKLRILF GTSQPVLPLA 
CSGSGAMTAA VHGLFVPGEK VIVVEGGKFG QRWREIAALR GLEVVSIVVE WGRAVSLAEV
EATLDAHPDA KGVLMQLSET STGVLHPVRG IATVTRKRDV LLVADGISAV GISPCPMDEW
GVDCLLTGSQ KGLMLPPGLA LIALSERAWR KADTVAPSCF YFNLPGERAN CEKGQTLFTT
PVSLIVGLGE SLDMFLEAGL ETVYRKQWAL TMLARAGTAA LGLAPLAPER FTWGLTSVML
PAGVDGTRLL QVAADNHGVV MAGGQDHLKG RILRIGHMGW VDWADIVAGL HAVASGLRTC
GAYVGARDYI ETGLAAYEAA LQVAPGTPV