| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2134 |
|---|
| Symbol | |
|---|
| ID | 4664751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2477108 |
|---|
| End bp | 2479384 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639820377 |
|---|
| Product | methyl-viologen-reducing hydrogenase, delta subunit |
|---|
| Protein accession | YP_967577 |
|---|
| Protein GI | 120603177 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins
[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.696722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCA GAATTGGCGT CTATTTTGAC CAGTCGAGCA TCGGCGGCGG CCTTGATGTC
GAAGCCCTGT CCGACGGCGT CTCGAAGAAG TGGGGAACGC TGACCCCCGT GGTCAAGGTG
CTTCCCGTCC TCGCAGCCGA GAAGGCGCGG GACGAGATTC GCGCCGACAT CGAAGAGAAC
GAACTTGACG GTGTCCTGCT CTGCGGTACC TCCCCCCGCG TTGACTGGGA CCTCTACAAG
TTCGATGGTG TCATCGTCGA CCGTGTTAAC CTTCGCGAAC AGTGTGTCCT GTCCTACAAG
AACCCCGACG GCTCCACTGT CGAGGAAGGG GATGACGCTC CTGAACTGCT CGTCAACCTT
GCCACCGACT ACCTGAACAT GGGTGTTGTC CGGTTGCAGA AGACGACGGC TCCTGAAGCC
GCCCCTGTCG AGAGCGTGCG CCGGGTGCTG GTGCTGGGTG GTGGCTGGAC GGGCCTTACG
GCTGCCCGCA ACGCCTCCAT CGCCGGCCTT GAGGTCGTTC TCGTCGAAAA GGGTGATGTC
CTTGGCGGCA AGACCCTGAA CCTGCACCAG ACCATCCCGC TTCATGCCCC GTATGTCGAG
GCACATGCCA CCGGCATCGA GCAGAAGATC GCCGACGTCG AGTCCGACGC GAACATCAAG
GTGCTCAAGG GCTCTGTCCT GACCAAGCTG GCGGGCATGC CCGGCGAGTT CACCGCCATC
GTCAAGACCC CCACTGGCGA TGAAGAGATC GCCGTTGGTG CCGTGGTCCT TGCCACGGGC
TGGCAGCCGC AGGATGCCAA GCTGCTTGCT CCTCTTGGCT ACGGCAATGT CCCCAACGTG
GTGACCTCCG CCGAGTTCGA GAAGATGGTC AAGGAAGGCA CCATGACCGC CCGTCGTGTT
GCCTTCATCC TGAACACGTC ACTGTGCGAC GGCGGCGACA TCTACGCTCC CTTCTGCGCT
GACGAGGCCG CTCCCGCCGA CGCTGCCGCC GAGGCTCCTG CCGAAGGCGA AGAGGCCGGC
CCCAAGTGCA AGGACCTCGA GAGCATCCGC CATCTGCCGT ACTCCAACTC CATCAGCAGC
GTGGTCGCCC TCAAGCAGGC CAACTACGTC TGTGACAAGT TCGAGGGCGC GCAGGCGTTC
ATCCTGTACG ACAGCATGGT GGTGCAGGGT ATCCACGAGC GCTACTACAA GGCCGCACAG
GACCGTCTCG GCATCATGAT GAGCAAGGCC GACATCCGCG AAGTCCGCGA AGGTGCCAAC
GGTACCGTGA GCGTGCTCTG CGACAACACG CTCATCGGCG ATGACATCCA GATCGACGTG
GACATGGTGG TGCTGCCCAC CGGCATCGTG CCTTCCACTG CGAAGGACGC CATCATGAAC
TTCGAATACC GTCAGGGCCC CGGCTTCCCG GACCTCGACC TCTTCGACGG TTTTGCCGAC
TCGAACTACA TCTGCTTCCC CTACGAGACC CGGCGTACCG GTGTCTACGC AGCCGGTTGC
GTGCGCCAGC CCATGACGCT CGATTCGTGC GAGGAAGACG CCATCGGTGC GGCCATGAAG
GCCATCCAGT GCATCGAGTC CGCCAATCGC GGTGTTGCCG TGCATCCTCG TTCAGGCGAC
CTCTCGTACC CCATCTTCAA CTTCGTGCGC TGCACCCAGT GCAAGCGCTG CACGGAAGAA
TGCCCCTTCG GCGCCCTTGA TGACGACGAG AAGGGCACTC CGAAGCCCAA CTACAGCCGC
TGCCGCCGTT GCGGTACCTG CATGGGTGCC TGCCCCGAGC GCGTCATCTC CTTCGCCAAC
TACAACATCG ACCAGATCGG TTCGATGATC CGCGAAGTGA ACGTCCCCGC AGACATGAAG
AAGGGTGGCC CCCGCGTCAT CATCCTCGCC TGCGAGAACG ACGCCTACCC CGCGCTCGAC
ATGGCCGCTC TCCGTGGCAA GCCGTGGAGC CCCTATGTCC GCATCATCCC CGTCCGCTGC
CTTGGTTCGG TCAACGCCAT ATGGGTTGCC GACGCCATGT CGAAGGGTAT CGACGGTGTC
ATGATGCTGG GCTGCAAGTA CGGTGACGAC TACCAGTGCC ACTTCGTCAA GGGCTCTGAA
ATCTGCAACC GCCGCAAGGA GAACATCGCC GAGACGCTGA ACCGCCTTGG CGTGGAACCC
GACCGTGTGG AGCAGTACGA AGTCGCCATC GACGAGTACG ACAAGCTGCC GGGCATGATC
GAAGGCTTCA TGAACATGAT CTTCGAGAAG GGTCCGAACC CGTTCAAGGG CTACTAG
|
|---|
| Protein sequence | MASRIGVYFD QSSIGGGLDV EALSDGVSKK WGTLTPVVKV LPVLAAEKAR DEIRADIEEN
ELDGVLLCGT SPRVDWDLYK FDGVIVDRVN LREQCVLSYK NPDGSTVEEG DDAPELLVNL
ATDYLNMGVV RLQKTTAPEA APVESVRRVL VLGGGWTGLT AARNASIAGL EVVLVEKGDV
LGGKTLNLHQ TIPLHAPYVE AHATGIEQKI ADVESDANIK VLKGSVLTKL AGMPGEFTAI
VKTPTGDEEI AVGAVVLATG WQPQDAKLLA PLGYGNVPNV VTSAEFEKMV KEGTMTARRV
AFILNTSLCD GGDIYAPFCA DEAAPADAAA EAPAEGEEAG PKCKDLESIR HLPYSNSISS
VVALKQANYV CDKFEGAQAF ILYDSMVVQG IHERYYKAAQ DRLGIMMSKA DIREVREGAN
GTVSVLCDNT LIGDDIQIDV DMVVLPTGIV PSTAKDAIMN FEYRQGPGFP DLDLFDGFAD
SNYICFPYET RRTGVYAAGC VRQPMTLDSC EEDAIGAAMK AIQCIESANR GVAVHPRSGD
LSYPIFNFVR CTQCKRCTEE CPFGALDDDE KGTPKPNYSR CRRCGTCMGA CPERVISFAN
YNIDQIGSMI REVNVPADMK KGGPRVIILA CENDAYPALD MAALRGKPWS PYVRIIPVRC
LGSVNAIWVA DAMSKGIDGV MMLGCKYGDD YQCHFVKGSE ICNRRKENIA ETLNRLGVEP
DRVEQYEVAI DEYDKLPGMI EGFMNMIFEK GPNPFKGY
|
|---|
| |