Gene Dvul_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2106 
Symbol 
ID4662132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2446767 
End bp2448431 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content64% 
IMG OID639820349 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_967549 
Protein GI120603149 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.958593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAC ACGCCCCCCA CTTCACCATC ACCCCCCTAG GCGGGCTTGG CGAAATCGGC 
CTCAATTGCC AGGTCTGGTC CACCGCAGAC AGCACGGTCC TCATCGACTG CGGGCTCATG
TTCCCGGACG ACTACCACCT CGGGGTGGAC GTGGTCATCC CGCGGTTCGA CCATATTCTC
CAGCAGCGCG ACAAGGTGCG GGGCATCATC CTCACGCACG GGCATGAAGA CCATATCGGT
GCGCTCCCGT GGCTTGTGCC GCACCTGCGC GGCATCCCCA TATTCGGGTC GCGTTTCACG
CTGGCACTCG TAGAGCACAA ACTGAGAGAG CACGGGCTGG CCGACAGGGT GGAATTCGTC
CCCGTCACCC CCGGAACGCC GCTTGCCCTC GGTGACATGA CCTTCCATTT CCTGCCCGTA
TGCCACTCCA TCATCGAAGG GTACGCCGTG GGTGTCGAAA CCCCGGTGGG CCGCGTACTG
CATACCGGCG ACTTCAAGAT AGACCCCCAC CCCCTCGAGG GTTCCGGCAC CGACCTCGAC
CTCTTCCGCA GCTTCGCCGG CGACGAAGGG GTACGGCTGC TGCTCTCCGA TTCCACCAAC
ATCGAACGTG AAGGCCATTC CCTGCCTGAA CGCGAGATAC TCTCCAGCTT CAGGCACATC
TTCACCGAGG CGCAGGGGCG CATCGTCATC ACGCTGTTCT CGAGCCACAT CCAGCGCATT
CAGGAGGTCT TCGACCTTGC GGCGGAGTTC GGCCGAACCG TGGTGGTGAG CGGGCGCAGC
CTCATGACGA ACATCGAACT CGCACGAGAG CACGGTTTCC TGCGCGTTCC CCCCGCGTTG
CACATGGATG CGGCAGGACT GCCCCCCGTG GCCGACCGCG ACATGGTCCT GCTGGTGACA
GGCTCACAGG GAGAGCCGCT CTCCGCCCTG TCACGCATCA CCATGGGTGA ACACAAGCAC
CTCACCATCC ATGAAGGCGA CACGGTGGTG ATGTCGTCAC GCATCATCCC CGGCAACGCC
CGCGCCATCA CCCGGCTCAT CAACCAGATA TACCGCCTCG GGGCCGAGGT GTACTACGAC
AAGTTCCGGG CCATCCACGC CTCCGGTCAT GCCCATCGCG ACGAGTTGCG CGCCATGATC
GAGACGATGC GCCCGCAGTG CTTCGTGCCC GTGCATGGCG AATACCGCCA CCTTGTCAAG
CACGCGCGCC TCGCGCAGGA ATGTGGCGTC GCCCCGGAGC GCGCCTTCAT CCTCGAGAAC
GGCGCCCCGC TCACCCTGCT TCCGCAAGGG GTGCGCCTCG GCGAACGCAT CCATGTGGAA
TCCATACTCG TGGACGGCAA GGGCGTAGGC GACGTGGGAC ACTCGGTGCT CAAGGAACGC
CACATCCTCG GCGGCGAGGG CATGGTCATC GTGGTGCTCG TCGTGGACGA GGTGACATGG
GATGTACTCC ACGGACCGGA GATGCTCTCC AAGGGCTTCG TCTTCGAGCA GCACTACAAC
CATGTGCTCG AAGACGCCAA ATGCATCGTC CTCGACATCT TCGAGAACAT CCCCCCCGGT
GAGACGGAAC GCCTGCAAGA CCGCATACGC TCCGCACTGC GTCGTTTCTT CCGCAAGGTG
CTCGAGCGGG ACCCCATCGT GGTGCCCGTC ATCACAACCA TCTAG
 
Protein sequence
MAEHAPHFTI TPLGGLGEIG LNCQVWSTAD STVLIDCGLM FPDDYHLGVD VVIPRFDHIL 
QQRDKVRGII LTHGHEDHIG ALPWLVPHLR GIPIFGSRFT LALVEHKLRE HGLADRVEFV
PVTPGTPLAL GDMTFHFLPV CHSIIEGYAV GVETPVGRVL HTGDFKIDPH PLEGSGTDLD
LFRSFAGDEG VRLLLSDSTN IEREGHSLPE REILSSFRHI FTEAQGRIVI TLFSSHIQRI
QEVFDLAAEF GRTVVVSGRS LMTNIELARE HGFLRVPPAL HMDAAGLPPV ADRDMVLLVT
GSQGEPLSAL SRITMGEHKH LTIHEGDTVV MSSRIIPGNA RAITRLINQI YRLGAEVYYD
KFRAIHASGH AHRDELRAMI ETMRPQCFVP VHGEYRHLVK HARLAQECGV APERAFILEN
GAPLTLLPQG VRLGERIHVE SILVDGKGVG DVGHSVLKER HILGGEGMVI VVLVVDEVTW
DVLHGPEMLS KGFVFEQHYN HVLEDAKCIV LDIFENIPPG ETERLQDRIR SALRRFFRKV
LERDPIVVPV ITTI