Gene Dvul_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2039 
Symbol 
ID4662417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2374952 
End bp2376382 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content63% 
IMG OID639820282 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_967482 
Protein GI120603082 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.238588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA GGCAGAGGGT GCTTCTCGTC GATGACGAGC AGGATTTCGC CAACGGGCTG 
GCTCGCCTCA TAGCCCGTCT TTTTCCAGAC GTGCACGTGG ATGTCGCCTT CTCCGGTCAG
GACGCGCTGG AGCATATCCG CAAGCAGCGC GTCCACGTCA TGGTGACCGA CCTGCGTATG
CCGGGTATGG GCGGCATGGA ACTGCTCAGG CGGGTCATGG AGACGGAACC CGATGTGAGT
GTCGTGGTGC TCACCGCCCA CGGCACCATC GAGACCGCGG TGGAAGCGTT GCAGGCCGGG
GCCTACGATT TCGTGACCAA GCCCGTCGAG CCTGAACAGG TGGCGCGCGT CCTTCGTAAG
GGGCTTGAGA GGGCACGCCT GCTCGACGAG AACAGGCGCT TGCGCGACCT CGTGGCACTG
GTGGGCGAAT CCGGTGAACT GGTGGGCGAG AGCCCCGCCA TGCAGTCTGT ACGCCGCACC
GTCGCCACGG TTGCCCCTTC CGACTACACC GTGCTCATTC GTGGCGAGTC GGGTACCGGC
AAGGAGATGG TCGCGCGGAT GGTACATCGT TTAAGTCCGC GTGTGGACGA ACCCTTTCTT
GCCCTCAATT GTCCGGCCAT TCCCGAACAT CTGCTTGAGA GCGAGCTCTT CGGTCACGTC
CGGGGAGCAT TCACAGGCGC GGAAAGGGAT CGCAAGGGCC TGTTCTCCAT TGCCGACGGT
GGCACCGTCC TGCTTGATGA AATCGGTGAC ATCTCATCGA ACATCCAGAC AAAACTGCTG
CGCTTCCTGC AAGAGGGAGA GGTGCGCCCC GTGGGGTCGC CCCGCAATGA GCACGTGGAC
GTCCGCATCA TCGCCTCCAC CAATCAGGAC CTTGAAGCCC GCATGGCGTC GCGCGACTTT
CGCGAAGACC TCTTCTACCG CCTCAACGTC GTCACCATCT GGGTTCCGCC GTTGCGTGAA
CGGCTTTCAG ACATCCCTCT GCTTGCGGCG ACGTTCCTCG CCCGTGCAAG TCGGGAACTC
GGTGTGCCGC AGCGTGACTT CGATGAAGGC GTCCTCGACC ATCTCATGCG GCGCGAATGG
CCGGGCAACG TGCGTGAATT GCAGAACTAC GTGCGCAGGC TCGCCCTGTT CAGCCGGGGG
GATGGCATCA CGCTTGATGC CGTGCAACAG GCCGAACAGA GCGAGAGCGG AGCCCCTGCC
GCCCTCTGTG TGCCGTCTCC CGTGGCGGAG GGAGAGGTGA TGCCCTACAA GGATGCCAAG
GCATCGCTGG TCGAGTCGTT CAGTGAGAGG TACCTGCGCG ACCTTCTGGA GAGTACGGGG
GGCAATGTCA CCGAGGCTGC CAGACTTTCG GGGCTGTCGC GCGTGTCCAT CCAGAAGATG
GTCGCCCGTT ACGGTATCGA TGCCGCAGCC ATGCGTGCCA ACGGCAGTTG A
 
Protein sequence
MANRQRVLLV DDEQDFANGL ARLIARLFPD VHVDVAFSGQ DALEHIRKQR VHVMVTDLRM 
PGMGGMELLR RVMETEPDVS VVVLTAHGTI ETAVEALQAG AYDFVTKPVE PEQVARVLRK
GLERARLLDE NRRLRDLVAL VGESGELVGE SPAMQSVRRT VATVAPSDYT VLIRGESGTG
KEMVARMVHR LSPRVDEPFL ALNCPAIPEH LLESELFGHV RGAFTGAERD RKGLFSIADG
GTVLLDEIGD ISSNIQTKLL RFLQEGEVRP VGSPRNEHVD VRIIASTNQD LEARMASRDF
REDLFYRLNV VTIWVPPLRE RLSDIPLLAA TFLARASREL GVPQRDFDEG VLDHLMRREW
PGNVRELQNY VRRLALFSRG DGITLDAVQQ AEQSESGAPA ALCVPSPVAE GEVMPYKDAK
ASLVESFSER YLRDLLESTG GNVTEAARLS GLSRVSIQKM VARYGIDAAA MRANGS