Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1976 |
Symbol | |
ID | 4663420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2295494 |
End bp | 2296840 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639820217 |
Product | HlyD family type I secretion membrane fusion protein |
Protein accession | YP_967419 |
Protein GI | 120603019 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGT TCCAATGGAA AAAACGCGAC AGTGTTGCGA GGGAAGACGT ACAATTCATG AGCGAGGTCG ATGCAGCCTT GCATCGGGCC GGGCATCCTT ATGCCTACCT GCTTTCGTGC GCCATCTTCG GCGTGTTCGC CATCTTTTTC GTGTGGGCGG CTTTCGCCCC GCTGGATGAG GTCACGCGCG GACAGGGGCA GGTCATTCCC TCGCAGCGTG TACAGGTCAT CCAGAACCTC GAAGGCGGCA TCCTGCGCGA ACTGCTCGTC CATGAGAGCC AGATTGTGGA AAAGGGCGAC GTGCTGCTGC GTATCGACAA CGAAGCAGCC GAGAGTTTCT ACCGCGATGC CCTTGGCAAG TCCGTCGAAC ACCAGATTGC CATCGCCCGC CTCGAAGCCG AACTCGAAGG GCGTGACCCC GTGTATCCTG CTGAACTCAT GACCGAATGG CCTCAGGTCG TGGAGAACCA GGCGGATGTC TACCGGGCGC GAAGACAGCA GGTCGCCGTC GAACAGAGGG TCCTCGAAGC GCAGCTGCAC CAGAAGGAGC AGGAAATCGA GGAGATGACG AGCCGCAAGC GACAGCTTGA AGATTCGTTG CGCGTCGCCG TGGAGCAACG TGAAATCGCC CGCCCGCTCA TGGAGAAGCA GATATACCCG CGCGTCGAGT ACCTTTCGCT CGAGCAGAAG GTCATCTCCC TGCGAGGCGA GATAAGCTCG CTTGCCATAT CCATTCCCAA GGCCCGCGCG GCAGCGGATG AGGCCAAGGA ACGCCTCGCC TTCCGCAAGG CACAGATACG TTCCGAGGCG CTTGAGGAAC TCAACAAACG ACGGGGCGAG TTGAACTCCC TGCGTGAGAC GCTTTCTGCC GGGGGCGACC GGGTGACACG TACCGACGTG CGCAGCCCGG TGCGAGGAAC GGTCAAGCGG CTCATCATCA ATACTGTCGG GGGGGTCATC AAACCGGGTG AGCCCATCAT GGAAATCGTG CCACTGGATG ACACCCTGCT CATCGAGGCC CGGATACGCC CCGCCGACAT CGCCTTCCTG CATCCCGACC AGAAGGCCGT GGTCAAGATA ACGGCCTATG ACTATTCCAT CTACGGGGGG CTTGAAGGGG TCGTCGAACA GATAAGCGCC GACACCATCG AGGACAGGAA GGGCGAGTTC TACTATCTGG TGAAGTTGCG CACCCGCAAG AGTGCCATCG TGTATCGGGG TGAGGCGCTG CCCATCATGC CCGGTATGAC CGCAACCGTG GATATTCTCA CAGGCAAGAA GACGGTTCTC GATTATCTGC TCAAGCCCAT CCTCAAGGCA CAGCAGAATG CCCTGCGGGA GCGTTGA
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Protein sequence | MPLFQWKKRD SVAREDVQFM SEVDAALHRA GHPYAYLLSC AIFGVFAIFF VWAAFAPLDE VTRGQGQVIP SQRVQVIQNL EGGILRELLV HESQIVEKGD VLLRIDNEAA ESFYRDALGK SVEHQIAIAR LEAELEGRDP VYPAELMTEW PQVVENQADV YRARRQQVAV EQRVLEAQLH QKEQEIEEMT SRKRQLEDSL RVAVEQREIA RPLMEKQIYP RVEYLSLEQK VISLRGEISS LAISIPKARA AADEAKERLA FRKAQIRSEA LEELNKRRGE LNSLRETLSA GGDRVTRTDV RSPVRGTVKR LIINTVGGVI KPGEPIMEIV PLDDTLLIEA RIRPADIAFL HPDQKAVVKI TAYDYSIYGG LEGVVEQISA DTIEDRKGEF YYLVKLRTRK SAIVYRGEAL PIMPGMTATV DILTGKKTVL DYLLKPILKA QQNALRER
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