Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1895 |
Symbol | |
ID | 4665071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 2208809 |
End bp | 2210245 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639820136 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_967339 |
Protein GI | 120602939 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.818173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTACAC GTGTCTTCCC CGAGCGCCCC ATACTTGTCG TTGACGACGA ACGAGCCGCA CTCGACGGCT TCGAGGTCGC CCTGGTGTCA TCGGGTTACA CCAACATCGT CACCATGGAT GACAGCAGAA AGGTACTACC CTTCATTGCC GAGCATGAAG CCGAGCTCAT ACTGCTGGAC CTCATCATGC CCCATGTGAG CGGCACTGAA CTCATAGAGG AGATAAAGCG CAGACGGCCC GAGGTACCGA TAATCATCAT CACCGCCGTA AACGACATAG ATTCTGTGGT TGAGTGCATA CGCAACGGCG CGCAGGACTA CATTCTCAAA CCGGTAGACA AGGACCATCT GCGCAACAGG GTTCAGCAGG CATTGGAGCG ACGGGAACTT GAGCGTGAGA ATCGGCTTCT GCGTGCATCT CTTCTGGATG GAGAAATACG GCATCCTGAG GCCTTTTCAG ATATCGTCAC TCAGGACCAC AAGATGCACG CGATATTCAG ATATTGCGAG GCGGTCGCCC CCAGCACGAA GCCCATACTC ATCACCGGAG AGACAGGGAC TGGCAAGGAG CTTGTCGCGC AGGCGCTCCA TCGCTTGAGC GGGCGCAAGG GGGAGTTCGT CGCCGTCAAC ATCGCGGCGT TTGACGACCC GGTATTTGCC GACACGCTCT TCGGACACTC CAGAGGTGCA TTCACAGGTG CCGACACGGC CCGGGCAGGG CTTGTCGAAA AGGCAGCGGG GGGGACGCTG TTCCTCGATG AGATAGGCGA CTTGCCAGCA CTGTCACAGG TCAAGCTGCT ACGGCTGTTG CAGGAGAAGG AGTACTTCCC CGTGGGGTCA GACAACGCGA AGAAGGCCAA CGTTCGAATC GTGGCATCGA CCCTCAAGAA CCTCGTCGAC CTGCGGCACA GGGGACTCTT TAGAGACGAC CTCTACTACA GGCTCACGAC ACACAGGATA CACATTCCTC CGCTGAGAGA GAGGCCTGGC GACATTCCCT GCCTCCTCGA CCACTTCCTC GAACTTGACG CACGGGAACA GAAACGCAAG CCGCCGTCAT ACCACCCGGA ACTAATCAAT CTGCTCAGGT CTTATGCCTT TCCCGGCAAT ATCCGAGAAC TTCGTGGCAT GGTCTCCGAT GCATTCATGA ACCACGCTTC ACACATGCTA TCATCATCTT CTTTCAGACA ATACATAATG AACGAATGCG ACACAAAATT GCTCACATCA TCAATAGGCA CAACGGACGA TTTAGAAACC TTACAATTCA CAACAGAAAA TCTTCCCACA CTCAAGTCTG CCATCGACAC GATGACATCA AAACTCATAT GCAAAGCCAT GGAAATCTCT GGTGGCAATC AGACAGTAGC ATCTGGACTT CTCGGCATAA CCCAACAAGC ATTGAGTGCA AAAATAAAAA AACTCAAATC GTATTAA
|
Protein sequence | MSTRVFPERP ILVVDDERAA LDGFEVALVS SGYTNIVTMD DSRKVLPFIA EHEAELILLD LIMPHVSGTE LIEEIKRRRP EVPIIIITAV NDIDSVVECI RNGAQDYILK PVDKDHLRNR VQQALERREL ERENRLLRAS LLDGEIRHPE AFSDIVTQDH KMHAIFRYCE AVAPSTKPIL ITGETGTGKE LVAQALHRLS GRKGEFVAVN IAAFDDPVFA DTLFGHSRGA FTGADTARAG LVEKAAGGTL FLDEIGDLPA LSQVKLLRLL QEKEYFPVGS DNAKKANVRI VASTLKNLVD LRHRGLFRDD LYYRLTTHRI HIPPLRERPG DIPCLLDHFL ELDAREQKRK PPSYHPELIN LLRSYAFPGN IRELRGMVSD AFMNHASHML SSSSFRQYIM NECDTKLLTS SIGTTDDLET LQFTTENLPT LKSAIDTMTS KLICKAMEIS GGNQTVASGL LGITQQALSA KIKKLKSY
|
| |