Gene Dvul_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1628 
Symbol 
ID4664246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1928724 
End bp1929866 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID639819867 
Productresponse regulator receiver protein 
Protein accessionYP_967072 
Protein GI120602672 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.311262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGATG AAAGCCCGCT CCTGATCATC ACCGACTCGG CACTGGTGCG TGATGCGCTG 
GTGACGCACA TCTCCGAAAC GCGTCGCCTG CTCATCGCCG ACAGTCACGA CGTCGGTATG
GAGTTGGCCC TCTCCTTCCG CCCCGCTCTC ATCCTGCTCG ATGCCTCGTC CACCGACGGC
GAAGCCCTTG CCCTGCTTCG GGCCTTCCGT TCCGAACCGC ATCTTGACGA TACGTTCATC
CTCGTGCTGA GCGACGAAGC CGCTGTGCTG GAACGTCTGG AGGCAAGCCG TGCCGGCGCA
GACGACTTTC TCCGGCTTCC TGTGGACCAG GCGGAACTGA CCGCCCGTGT CGCCGTCGCC
TTGCGGCAGG CGCGTCTTTC ACGACGCCTT CGGGCCTACA CACGCCGCAT CGAAGAGGAG
ATGCGGCTCG TGGCAGACCT GCAGATGAGG CTGCTGCCAG CCTACACACC CTACCTTGCG
TCGCTGCGCA TCGACAGTTT CTACCAGCCC TCCACAGAAG CCAGCGGCGA CTACTTCGAC
CATTTCCTGT TGCCCGGAGA AGACAGACTA CGGGTCGTCA TCGCCGACGC CTCCGGGCAT
GGCGCCCGTT CCGCCGTTCT CATGACCATG GTGCGCACGC TGTTCCACGC CAGCCATGCC
GCGAATACGC CGCTCACGGA CATGCTGCTC GAGATCAACA CCAACCTGCT GGATGTGGTC
GGCAACGAGC CGGACTTCGT CACGCTCTTC GCAGCTGACC TCGACCTCAG GGGCAACACA
CTCCGGTACG TCAACGCCGG ACACTGCCCC GCCCTTCTTC GTCACCCTGA CGGGACGACC
ATGCGGCTTT CCGGAACGAC TCCGCTGCTC GGTTTCTTCG GCGTGCGGGA AACGGAACGG
CTTGTGCCCT TCACACCGGG TACACGCCTG TTGCTGTATA CCGACGGTTT TCACGATTGC
GCCACCGCGA GTGGACGCCG ACTTGGCATC GACCGCTTCC TGTCGCTGGC AGAAGCCACG
ATGCGGCGTG GCGGTGATGT GCTTTCATCG TTACGCGAGG ACATCTCCAC CACCTTTGGC
GAACCCCCGA CATGGCCCGA TGACGTCACC GCCCTCTATA TCGAACGCAA GGAGGAGGCA
TGA
 
Protein sequence
MQDESPLLII TDSALVRDAL VTHISETRRL LIADSHDVGM ELALSFRPAL ILLDASSTDG 
EALALLRAFR SEPHLDDTFI LVLSDEAAVL ERLEASRAGA DDFLRLPVDQ AELTARVAVA
LRQARLSRRL RAYTRRIEEE MRLVADLQMR LLPAYTPYLA SLRIDSFYQP STEASGDYFD
HFLLPGEDRL RVVIADASGH GARSAVLMTM VRTLFHASHA ANTPLTDMLL EINTNLLDVV
GNEPDFVTLF AADLDLRGNT LRYVNAGHCP ALLRHPDGTT MRLSGTTPLL GFFGVRETER
LVPFTPGTRL LLYTDGFHDC ATASGRRLGI DRFLSLAEAT MRRGGDVLSS LREDISTTFG
EPPTWPDDVT ALYIERKEEA